RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 EPN1Q9Y6I3 576 aaPredicted RBP20.06■□□□□ 0.8
VHL-202ENST00000345392 PAPPAQ13219 1627 aa20.06■□□□□ 0.8
VHL-202ENST00000345392 ATP1A1P05023 1023 aaKnown RBP20.05■□□□□ 0.8
VHL-202ENST00000345392 LIMA1Q9UHB6 759 aaKnown RBP20.05■□□□□ 0.8
VHL-202ENST00000345392 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 NDUFA10O95299 355 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 USP14P54578 494 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 UBXN1Q04323 297 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 TRAPPC11Q7Z392 1133 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 MIGA1Q8NAN2 632 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 AFAP1L1Q8TED9 768 aa20.05■□□□□ 0.8
VHL-202ENST00000345392 ZNF512BQ96KM6 892 aaPredicted RBP20.05■□□□□ 0.8
VHL-202ENST00000345392 XDHP47989 1333 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 CCDC196A0A1B0GTZ2 297 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.04■□□□□ 0.8
VHL-202ENST00000345392 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 LRRC10BA6NIK2 292 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 KCNJ18B7U540 433 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 PES1O00541 588 aaKnown RBP20.04■□□□□ 0.8
VHL-202ENST00000345392 RASGRF1Q13972 1273 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 KCNJ12Q14500 433 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 TTC31Q49AM3 519 aaPredicted RBP20.04■□□□□ 0.8
VHL-202ENST00000345392 TCP11X2Q5H9J9 407 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 HPCAL4Q9UM19 191 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 SLC4A4Q9Y6R1 1079 aa20.04■□□□□ 0.8
VHL-202ENST00000345392 PRPF6O94906 941 aaKnown RBP20.03■□□□□ 0.8
VHL-202ENST00000345392 TUBBP07437 444 aa20.03■□□□□ 0.8
VHL-202ENST00000345392 MTRQ99707 1265 aa20.03■□□□□ 0.8
VHL-202ENST00000345392 TTC26A0AVF1 554 aa20.03■□□□□ 0.8
VHL-202ENST00000345392 ARID4AP29374 1257 aaPredicted RBP20.03■□□□□ 0.8
VHL-202ENST00000345392 PKN1Q16512 942 aa20.03■□□□□ 0.8
VHL-202ENST00000345392 SPATA5Q8NB90 893 aa20.03■□□□□ 0.8
VHL-202ENST00000345392 NELFBQ8WX92 580 aa20.03■□□□□ 0.8
VHL-202ENST00000345392 KRT2P35908 639 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 CORO7P57737 925 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 PAK1Q13153 545 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 PTGDRQ13258 359 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 STAG1Q8WVM7 1258 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 V9GY48 417 aaPredicted RBP20.02■□□□□ 0.8
VHL-202ENST00000345392 MYBL2P10244 700 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 GGCXP38435 758 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 MAP3K12Q12852 859 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 UBAC1Q9BSL1 405 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 GDAQ9Y2T3 454 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 SAR1BQ9Y6B6 198 aa20.02■□□□□ 0.8
VHL-202ENST00000345392 LRP6O75581 1613 aa20.02■□□□□ 0.79
VHL-202ENST00000345392 CCDC122Q5T0U0 273 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 NID2Q14112 1375 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 MINDY4BA8MYZ0 360 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 PPFIA4O75335 1185 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 AARSP49588 968 aaKnown RBP eCLIP20.01■□□□□ 0.79
VHL-202ENST00000345392 PHF20Q9BVI0 1012 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 VIPAS39Q9H9C1 493 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 RWDD2AQ9UIY3 292 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 CDHR2Q9BYE9 1310 aa20.01■□□□□ 0.79
VHL-202ENST00000345392 TRIM49BA6NDI0 452 aa20■□□□□ 0.79
VHL-202ENST00000345392 ZNF185O15231 689 aa20■□□□□ 0.79
VHL-202ENST00000345392 UQCRFS1P1P0C7P4 283 aa20■□□□□ 0.79
VHL-202ENST00000345392 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
VHL-202ENST00000345392 BCAMP50895 628 aa20■□□□□ 0.79
VHL-202ENST00000345392 HERVK_113P62684 666 aa20■□□□□ 0.79
VHL-202ENST00000345392 STIM1Q13586 685 aa20■□□□□ 0.79
VHL-202ENST00000345392 ANKRD20A12PQ8NF67 263 aa20■□□□□ 0.79
VHL-202ENST00000345392 FERMT2Q96AC1 680 aa20■□□□□ 0.79
VHL-202ENST00000345392 ZC3H4Q9UPT8 1303 aaKnown RBP20■□□□□ 0.79
VHL-202ENST00000345392 PSMD14O00487 310 aa20■□□□□ 0.79
VHL-202ENST00000345392 PLEKHA8P1O95397 391 aa20■□□□□ 0.79
VHL-202ENST00000345392 XBP1P17861 261 aa20■□□□□ 0.79
VHL-202ENST00000345392 GTF2A1P52655 376 aaPredicted RBP20■□□□□ 0.79
VHL-202ENST00000345392 CTR9Q6PD62 1173 aa20■□□□□ 0.79
VHL-202ENST00000345392 DZIP3Q86Y13 1208 aaKnown RBP20■□□□□ 0.79
VHL-202ENST00000345392 COG1Q8WTW3 980 aa20■□□□□ 0.79
VHL-202ENST00000345392 SMARCC1Q92922 1105 aaPredicted RBP20■□□□□ 0.79
VHL-202ENST00000345392 RNF26Q9BY78 433 aaPredicted RBP20■□□□□ 0.79
VHL-202ENST00000345392 TNKSO95271 1327 aa20■□□□□ 0.79
VHL-202ENST00000345392 PUM3Q15397 648 aaKnown RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 ICE2Q659A1 982 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 TMTC2Q8N394 836 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 OR8K1Q8NGG5 319 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 CTCFLQ8NI51 663 aaPredicted RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 NACAP1Q9BZK3 213 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 RABEP2Q9H5N1 569 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 AHDC1Q5TGY3 1603 aaPredicted RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 WTIPA6NIX2 430 aaPredicted RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 PDE8AO60658 829 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 PRCPP42785 496 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 TRIM14Q14142 442 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 E2F4Q16254 413 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 TTC38Q5R3I4 469 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 HAUS4Q9H6D7 363 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 BTG4Q9NY30 223 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 JRKLQ9Y4A0 524 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 BAZ2BQ9UIF8 2168 aaKnown RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 SPAG1Q07617 926 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 MAP9Q49MG5 647 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 WDR59Q6PJI9 974 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 SDR42E1Q8WUS8 393 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 EEF2KMTQ96G04 330 aa19.99■□□□□ 0.79
VHL-202ENST00000345392 LUC7L2Q9Y383 392 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms