RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
LIN54-201ENST00000340417 AKT3Q9Y243 479 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 MSANTD4Q8NCY6 345 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 NACA2Q9H009 215 aa14.4□□□□□ -0.1
LIN54-201ENST00000340417 SCG2P13521 617 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 POLGP54098 1239 aaPredicted RBP14.39□□□□□ -0.11
LIN54-201ENST00000340417 FOXO4P98177 505 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 SLFN12Q8IYM2 578 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 CCL15-CCL14A0A0B4J2E2 113 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 CSPG5O95196 566 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 MRE11P49959 708 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 SEPT2Q15019 361 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 CCL15Q16663 113 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 CCDC97Q96F63 343 aaPredicted RBP14.39□□□□□ -0.11
LIN54-201ENST00000340417 MXD3Q9BW11 206 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 FEM1BQ9UK73 627 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 BICDL2A1A5D9 508 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 SNRNP48Q6IEG0 339 aaKnown RBP14.39□□□□□ -0.11
LIN54-201ENST00000340417 FCER1AP12319 257 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 MIS18BP1Q6P0N0 1132 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 RNF207Q6ZRF8 634 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
LIN54-201ENST00000340417 PLA2G12BQ9BX93 195 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L15C9J2P7 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L13C9JLJ4 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L11C9JVI0 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L18D6R9N7 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L22D6RA61 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L17D6RBQ6 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L19D6RCP7 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L20D6RJB6 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 USP17L24Q0WX57 530 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 ARHGAP29Q52LW3 1261 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 KIF1AQ12756 1690 aa14.39□□□□□ -0.11
LIN54-201ENST00000340417 N4BP3O15049 544 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 DDNO94850 711 aaPredicted RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 CETPP11597 493 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 MCM4P33991 863 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 HMGCS2P54868 508 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 KRT40Q6A162 431 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 DDX25Q9UHL0 483 aaKnown RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 UBE2HP62256 183 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIN54-201ENST00000340417 MROH2AA6NES4 1674 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 ARID3AQ99856 593 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 RAVER2Q9HCJ3 691 aaKnown RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 KRT19P08727 400 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 YARSP54577 528 aaKnown RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 PTH1RQ03431 593 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 ANKRD13AQ8IZ07 590 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 ZSCAN20P17040 1043 aaPredicted RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 SNAP25P60880 206 aa14.38□□□□□ -0.11
LIN54-201ENST00000340417 DNM1Q05193 864 aaKnown RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 CDC37Q16543 378 aaPredicted RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 DCAF17Q5H9S7 520 aaPredicted RBP14.38□□□□□ -0.11
LIN54-201ENST00000340417 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 DEFB129Q9H1M3 183 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 PRDM5Q9NQX1 630 aaPredicted RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 SMC1AQ14683 1233 aaKnown RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 GALNT17Q6IS24 598 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 DCAF4Q8WV16 495 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 OSBP2Q969R2 916 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 RPS6KC1Q96S38 1066 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 SEPT9Q9UHD8 586 aaPredicted RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 SRGNP10124 158 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 COPB2P35606 906 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 TFDP1Q14186 410 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 NBPF11Q86T75 865 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 GOLGA1Q92805 767 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 ZNF577Q9BSK1 485 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 CYP2E1P05181 493 aaPredicted RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 CYP2D6P10635 497 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 PIGSQ96S52 555 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 PCDHA12Q9UN75 941 aa14.37□□□□□ -0.11
LIN54-201ENST00000340417 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
LIN54-201ENST00000340417 UTYO14607 1347 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 UBE2Q2LH0YL09 131 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 FAM200AQ8TCP9 573 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 VWDEQ8N2E2 1590 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 ZNF827Q17R98 1081 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 SKIDA1Q1XH10 827 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 NEK8Q86SG6 692 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 CABP7Q86V35 215 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 ATP6V0A1Q93050 837 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 LBHD1Q9BQE6 289 aaPredicted RBP14.36□□□□□ -0.11
LIN54-201ENST00000340417 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 NT5C3AQ9H0P0 336 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 CALUO43852 315 aaPredicted RBP14.36□□□□□ -0.11
LIN54-201ENST00000340417 USO1O60763 962 aaKnown RBP14.36□□□□□ -0.11
LIN54-201ENST00000340417 NEFHP12036 1026 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms