RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 KCTD17Q8N5Z5 321 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 SLC26A6Q9BXS9 759 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
NUP43-201ENST00000340413 FEM1BQ9UK73 627 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 GLTPD2A6NH11 291 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 WDR46O15213 610 aaKnown RBP8.27□□□□□ -1.09
NUP43-201ENST00000340413 USP48Q86UV5 1035 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 USP25Q9UHP3 1055 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 HACL1Q9UJ83 578 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 M0R2N6 131 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 OAZ1P54368 228 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 KRT25Q7Z3Z0 450 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 CHURC1Q8WUH1 139 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
NUP43-201ENST00000340413 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
NUP43-201ENST00000340413 PCDHA4Q9UN74 947 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 SSC5DA1L4H1 1573 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 MYSM1Q5VVJ2 828 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
NUP43-201ENST00000340413 GTF3C2Q8WUA4 911 aaPredicted RBP8.26□□□□□ -1.09
NUP43-201ENST00000340413 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 INCENPQ9NQS7 918 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 KLRF2D3W0D1 207 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 PRDM1O75626 825 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 YBX3P16989 372 aaKnown RBP eCLIP8.26□□□□□ -1.091e-8■■■□□ 16.7
NUP43-201ENST00000340413 RASA3Q14644 834 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
NUP43-201ENST00000340413 C6orf50Q9HD87 102 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 VPS37CA5D8V6 355 aaPredicted RBP8.26□□□□□ -1.09
NUP43-201ENST00000340413 USP17L5A8MUK1 530 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 STXBP3O00186 592 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 CTAGE5O15320 804 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 PRPHP41219 470 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 AP3B2Q13367 1082 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 TKFCQ3LXA3 575 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 ARL6IP4Q66PJ3 421 aaKnown RBP8.26□□□□□ -1.09
NUP43-201ENST00000340413 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 ZSCAN29Q8IWY8 852 aaPredicted RBP8.26□□□□□ -1.09
NUP43-201ENST00000340413 ZFPM1Q8IX07 1006 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 SLC44A5Q8NCS7 719 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 TIGD1Q96MW7 591 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 RNF181Q9P0P0 153 aa8.26□□□□□ -1.09
NUP43-201ENST00000340413 PTPRFP10586 1907 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 COPB2P35606 906 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 C9orf131Q5VYM1 1079 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 NUP133Q8WUM0 1156 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 DDX19AQ9NUU7 478 aaKnown RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 ZBTB12Q9Y330 459 aaPredicted RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 ZBTB5O15062 677 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 CAVIN2O95810 425 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 EEF2P13639 858 aaKnown RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 ZNF445P59923 1031 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 SLC39A14Q15043 492 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 SLFN13Q68D06 897 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 SIAH1Q8IUQ4 282 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 RANBP17Q9H2T7 1088 aaKnown RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 RIC8AQ9NPQ8 531 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 ABCB11O95342 1321 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 TRPM7Q96QT4 1865 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 TCP10L2B9ZVM9 353 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 FOSP01100 380 aaPredicted RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 GCFC2P16383 781 aaKnown RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 LEO1Q8WVC0 666 aaPredicted RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 GTPBP4Q9BZE4 634 aaKnown RBP8.25□□□□□ -1.09
NUP43-201ENST00000340413 STX8Q9UNK0 236 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 SLC45A1Q9Y2W3 748 aa8.25□□□□□ -1.09
NUP43-201ENST00000340413 ATP2A1O14983 1001 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 TRAK2O60296 914 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 CUTAO60888 179 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 PLEKHA8P1O95397 391 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 BMP3P12645 472 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 NBPF9Q3BBW0 867 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 ADALQ6DHV7 355 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 CLIP2Q9UDT6 1046 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 RLFQ13129 1914 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 LOC102724159A0A0B4J2E5 919 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 PKP1Q13835 747 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 PWP2Q15269 919 aaKnown RBP8.24□□□□□ -1.09
NUP43-201ENST00000340413 ANO1Q5XXA6 986 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 LBX2Q6XYB7 198 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 BLIDQ8IZY5 108 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 DCPSQ96C86 337 aaKnown RBP8.24□□□□□ -1.09
NUP43-201ENST00000340413 NAP1L2Q9ULW6 460 aaPredicted RBP8.24□□□□□ -1.09
NUP43-201ENST00000340413 ZNF236Q9UL36 1845 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 NF2P35240 595 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 CLK2P49760 499 aaKnown RBP8.24□□□□□ -1.09
NUP43-201ENST00000340413 NPY5RQ15761 445 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 SYDE2Q5VT97 1194 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 RBM43Q6ZSC3 357 aaKnown RBP8.24□□□□□ -1.09
NUP43-201ENST00000340413 SPRYD3Q8NCJ5 442 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 LINC00301Q8NCQ3 95 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
NUP43-201ENST00000340413 FOXD4L1Q9NU39 408 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms