RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SNCAIPQ9Y6H5 919 aa16.87■□□□□ 0.29
NIPAL3-202ENST00000339255 CNTNAP5Q8WYK1 1306 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 C19orf81C9J6K1 198 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 PLEKHA8P1O95397 391 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 LDLRAD1Q5T700 205 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 ZHX2Q9Y6X8 837 aa16.86■□□□□ 0.29
NIPAL3-202ENST00000339255 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 RAD21O60216 631 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 DEXIO95424 95 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 ITGBL1O95965 494 aaPredicted RBP16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 NUCB2P80303 420 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 STAG2Q8N3U4 1231 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 PHKBQ93100 1093 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 SLC26A6Q9BXS9 759 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 LOC285556D6RIA3 1793 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 BMP3P12645 472 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 BACE1P56817 501 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 PPATQ06203 517 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 C2orf69Q8N8R5 385 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 ZNF408Q9H9D4 720 aa16.85■□□□□ 0.29
NIPAL3-202ENST00000339255 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 WDR46O15213 610 aaKnown RBP16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 CELF2O95319 508 aaKnown RBP16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 FDPSP14324 419 aaKnown RBP16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 SPP2Q13103 211 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 MTMR2Q13614 643 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 CCDC84Q86UT8 332 aaPredicted RBP16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 AFG3L2Q9Y4W6 797 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
NIPAL3-202ENST00000339255 FRMPD2Q68DX3 1309 aaPredicted RBP16.83■□□□□ 0.29
NIPAL3-202ENST00000339255 TRIM75PA6NK02 468 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 PLA2G6O60733 806 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 SYT1P21579 422 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 RASGRP2Q7LDG7 609 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 FAM177A1Q8N128 213 aaPredicted RBP16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 C12orf42Q96LP6 360 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
NIPAL3-202ENST00000339255 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 KIF3CO14782 793 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 STX6O43752 255 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 XBP1P17861 261 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 STAT2P52630 851 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 PPIL2Q13356 520 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 KCTD1Q719H9 257 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 SPICE1Q8N0Z3 855 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 ELP3Q9H9T3 547 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
NIPAL3-202ENST00000339255 UBE2Q2LH0YL09 131 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 TRIM29Q14134 588 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 SH3D19Q5HYK7 790 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 FAM160B2Q86V87 743 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 CHURC1Q8WUH1 139 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 ALG1Q9BT22 464 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 TMOD4Q9NZQ9 345 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 H3BQV1 296 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 hCG_1984214I3L0E3 225 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 CXCL11O14625 94 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 CYTH3O43739 400 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 PPFIA3O75145 1194 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 SCG2P13521 617 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 IKQ13123 557 aaPredicted RBP16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 PFKFB3Q16875 520 aaPredicted RBP16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 FAM83BQ5T0W9 1011 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 ZNF713Q8N859 430 aaPredicted RBP16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 SLC10A4Q96EP9 437 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 C8orf76Q96K31 380 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 NUP88Q99567 741 aaPredicted RBP16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
NIPAL3-202ENST00000339255 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 TMEM232C9JQI7 657 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 TOMM70O94826 608 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 VCAM1P19320 739 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 FMR1Q06787 632 aaKnown RBP eCLIP16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 KIAA1755Q5JYT7 1200 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 SH3GLB2Q9NR46 395 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 EMILIN3Q9NT22 766 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms