RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 DKK1O94907 266 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 SGPL1O95470 568 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 CRKP46108 304 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 ELOAQ14241 798 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 DCAF15Q66K64 600 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 FAM83AQ86UY5 434 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 CPA4Q9UI42 421 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 JAG2Q9Y219 1238 aa11.73□□□□□ -0.53
UBE2D3-202ENST00000338145 PDHXO00330 501 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 HIBADHP31937 336 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 BMP8BP34820 402 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 SMTNP53814 917 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 FCGRTP55899 365 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 ZNF358Q9NW07 568 aa11.72□□□□□ -0.53
UBE2D3-202ENST00000338145 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 RFX1P22670 979 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 CTGFP29279 349 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 TLR1Q15399 786 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 CRTC2Q53ET0 693 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 TAF7LQ5H9L4 462 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 ZKSCAN4Q969J2 545 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 PARK7Q99497 189 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 ZNF341Q9BYN7 854 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 CNNM1Q9NRU3 951 aa11.71□□□□□ -0.53
UBE2D3-202ENST00000338145 ARAP2Q8WZ64 1704 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 APAF1O14727 1248 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 ATG7O95352 703 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 TFRCP02786 760 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 SEC13P55735 322 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 FOXO4P98177 505 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 PRKCZQ05513 592 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 DDX10Q13206 875 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 ANKMY2Q8IV38 441 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 TEKT1Q969V4 418 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 KCNH4Q9UQ05 1017 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 STXBP5LQ9Y2K9 1186 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 LAMA3Q16787 3333 aa11.7□□□□□ -0.54
UBE2D3-202ENST00000338145 RPAP1Q9BWH6 1393 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 ADGRA2Q96PE1 1338 aa11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 A6NJY4 79 aa11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 PLIN1O60240 522 aa11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 ZSWIM8A7E2V4 1837 aa11.69□□□□□ -0.54
UBE2D3-202ENST00000338145 MAST3O60307 1309 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 FIGNL2A6NMB9 653 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 CDK2AP1O14519 115 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 CXCL11O14625 94 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 ADCY3O60266 1144 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 STAU1O95793 577 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 BCRP11274 1271 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 GYG1P46976 350 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 LRIT3Q3SXY7 679 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 GNASQ5JWF2 1037 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 G2E3Q7L622 706 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 NECAB2Q7Z6G3 386 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 VPS37DQ86XT2 251 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 DEFB123Q8N688 67 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 RHBDD1Q8TEB9 315 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 GDF15Q99988 308 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
UBE2D3-202ENST00000338145 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 EPHA4P54764 986 aa11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 CAVIN4Q5BKX8 364 aa11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 TAS1R3Q7RTX0 852 aa11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 DEFB118Q96PH6 123 aa11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 PAK6Q9NQU5 681 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
UBE2D3-202ENST00000338145 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 FLT3LGP49771 235 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 CACNB3P54284 484 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 DPYDQ12882 1025 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 TMEM214Q6NUQ4 689 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms