RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 CATIPQ7Z7H3 387 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 GMCL1Q96IK5 515 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 P2RX7Q99572 595 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 ASCC2Q9H1I8 757 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 ZSWIM6Q9HCJ5 1215 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 TBC1D8O95759 1140 aa13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 RPS6KB1P23443 525 aa13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 FAM83BQ5T0W9 1011 aa13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 CFHR5Q9BXR6 569 aa13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 LAMB1P07942 1786 aa13.94□□□□□ -0.18
SPTLC1-202ENST00000337841 OTOFQ9HC10 1997 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 SH2B2O14492 632 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 TLR2O60603 784 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 ABCB7O75027 752 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 FLOT1O75955 427 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 CYP2C8P10632 490 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 CRHR2Q13324 411 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 FAM160B2Q86V87 743 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 PRPF38AQ8NAV1 312 aaKnown RBP13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 LRRC2Q9BYS8 371 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 CTDP1Q9Y5B0 961 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
SPTLC1-202ENST00000337841 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 PLA2G6O60733 806 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 CALM1P0DP23 149 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 CALM2P0DP24 149 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 CALM3P0DP25 149 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 PDHBP11177 359 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 CPA1P15085 419 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 RBM25P49756 843 aaKnown RBP13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 HERVK_113P62684 666 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 Q6ZUG5 572 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 IL17RAQ96F46 866 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
SPTLC1-202ENST00000337841 MYPNQ86TC9 1320 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 ZBED4O75132 1171 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 SNHG28P0DPA3 235 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 FDX1P10109 184 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 ASPRV1Q53RT3 343 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 MB21D1Q8N884 522 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 SLF1Q9BQI6 1058 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 SENP2Q9HC62 589 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
SPTLC1-202ENST00000337841 GPR25O00155 361 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 DDAH1O94760 285 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 KIF5BP33176 963 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 CTCFP49711 727 aaPredicted RBP13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 GNAQP50148 359 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 STAT2P52630 851 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 COL9A3Q14050 684 aaPredicted RBP13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 C17orf99Q6UX52 265 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 LBX2Q6XYB7 198 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 IL27Q8NEV9 243 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 KIFC2Q96AC6 838 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 CPA4Q9UI42 421 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 NAP1L2Q9ULW6 460 aaPredicted RBP13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 RABGAP1Q9Y3P9 1069 aa13.9□□□□□ -0.18
SPTLC1-202ENST00000337841 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
SPTLC1-202ENST00000337841 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 NEK4P51957 841 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 SP3Q02447 781 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 TROAPQ12815 778 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 KIF22Q14807 665 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 GRM4Q14833 912 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 ARHGEF6Q15052 776 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 BTNL9Q6UXG8 535 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms