RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 KIF9Q9HAQ2 790 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 WWC3Q9ULE0 1092 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 TCIRG1Q13488 830 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 RAPGEF1Q13905 1077 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 UBLCP1Q8WVY7 318 aaPredicted RBP17.79■□□□□ 0.44
NPHP3-201ENST00000337331 PNKPQ96T60 521 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 CLIC4Q9Y696 253 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 FAM13AO94988 1023 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 TXKP42681 527 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 DPF2Q92785 391 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 SERTAD1Q9UHV2 236 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 RIMBP2O15034 1052 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 NNTQ13423 1086 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 MTF1Q14872 753 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 GPIHBP1Q8IV16 184 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 AATFQ9NY61 560 aaKnown RBP eCLIP17.79■□□□□ 0.44
NPHP3-201ENST00000337331 FGAP02671 866 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 DCAF17Q5H9S7 520 aaPredicted RBP17.78■□□□□ 0.44
NPHP3-201ENST00000337331 HAUS7Q99871 368 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
NPHP3-201ENST00000337331 KDRP35968 1356 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 IKBKBO14920 756 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 MRPL12P52815 198 aaKnown RBP17.78■□□□□ 0.44
NPHP3-201ENST00000337331 ATP11AP98196 1134 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 PARP9Q8IXQ6 854 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 CCDC63Q8NA47 563 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 L1RE1Q9UN81 338 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 PCDHA5Q9Y5H7 936 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 CASP14P31944 242 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 PRPHP41219 470 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 TRIM14Q14142 442 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 GKAP1Q5VSY0 366 aaPredicted RBP17.78■□□□□ 0.44
NPHP3-201ENST00000337331 USP37Q86T82 979 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
NPHP3-201ENST00000337331 MIEF2Q96C03 454 aa17.78■□□□□ 0.44
NPHP3-201ENST00000337331 FBF1Q8TES7 1133 aa17.77■□□□□ 0.44
NPHP3-201ENST00000337331 GPCPD1Q9NPB8 672 aa17.77■□□□□ 0.44
NPHP3-201ENST00000337331 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
NPHP3-201ENST00000337331 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
NPHP3-201ENST00000337331 COPRSQ9NQ92 184 aa17.77■□□□□ 0.44
NPHP3-201ENST00000337331 TMEM110-MUSTN1A8MSY1 372 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.43
NPHP3-201ENST00000337331 TMED8Q6PL24 325 aaPredicted RBP17.77■□□□□ 0.43
NPHP3-201ENST00000337331 RPGRIP1Q96KN7 1286 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 SUDS3Q9H7L9 328 aaPredicted RBP17.77■□□□□ 0.43
NPHP3-201ENST00000337331 TFCP2L1Q9NZI6 479 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 LRRD1A4D1F6 860 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 OGFOD1Q8N543 542 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 FAM167BQ9BTA0 163 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 TRIM4Q9C037 500 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
NPHP3-201ENST00000337331 A0A1W2PRG0 241 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 PPP1R2P41236 205 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 POLE2P56282 527 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 TNNC1P63316 161 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 RBL2Q08999 1139 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 TSC22D3Q99576 134 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 MYOM2P54296 1465 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 CYP21A2P08686 494 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 PLS1Q14651 629 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 EGFL6Q8IUX8 553 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 IFT20Q8IY31 132 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 ZNF654Q8IZM8 581 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 RASAL2Q9UJF2 1139 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 G3BP2Q9UN86 482 aaKnown RBP17.76■□□□□ 0.43
NPHP3-201ENST00000337331 GNPATO15228 680 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 CRYMQ14894 314 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 CCDC24Q8N4L8 307 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 COG1Q8WTW3 980 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 BLZF1Q9H2G9 400 aa17.76■□□□□ 0.43
NPHP3-201ENST00000337331 BTBD18B2RXH4 712 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 SRGAP2O75044 1071 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 PHKG2P15735 406 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 GJC1P36383 396 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 TCHPQ9BT92 498 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 NSRP1Q9H0G5 558 aaKnown RBP17.75■□□□□ 0.43
NPHP3-201ENST00000337331 CCNT1O60563 726 aaKnown RBP17.75■□□□□ 0.43
NPHP3-201ENST00000337331 LRRC23Q53EV4 343 aaPredicted RBP17.75■□□□□ 0.43
NPHP3-201ENST00000337331 CNNM4Q6P4Q7 775 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 UGGT1Q9NYU2 1555 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 RPL13P26373 211 aaKnown RBP17.75■□□□□ 0.43
NPHP3-201ENST00000337331 PDIA3P30101 505 aaKnown RBP17.75■□□□□ 0.43
NPHP3-201ENST00000337331 KCNJ6P48051 423 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 SLC7A5Q01650 507 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 NOSTRINQ8IVI9 506 aa17.75■□□□□ 0.43
NPHP3-201ENST00000337331 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
NPHP3-201ENST00000337331 PDE6AP16499 860 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 CMA1P23946 247 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 IL25Q9H293 177 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 ACTR5Q9H9F9 607 aaPredicted RBP17.74■□□□□ 0.43
NPHP3-201ENST00000337331 HOMER2Q9NSB8 354 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 IKBKGQ9Y6K9 419 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 METP08581 1390 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms