RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NBPF11Q86T75 865 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 SPICE1Q8N0Z3 855 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 C2orf69Q8N8R5 385 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 DCAF4Q8WV16 495 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 GMCL1Q96IK5 515 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 NUP88Q99567 741 aaPredicted RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 FEZ1Q99689 392 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 LLPHQ9BRT6 129 aaKnown RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 GOPCQ9HD26 462 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 ABT1Q9ULW3 272 aaKnown RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 CCDC196A0A1B0GTZ2 297 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 UNCXA6NJT0 531 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 TRIM75PA6NK02 468 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 USP17L10C9JJH3 530 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 CPLX1O14810 134 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 RAD21O60216 631 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 KIF5BP33176 963 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 ERO1BQ86YB8 467 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 SRBD1Q8N5C6 995 aaKnown RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 PTPDC1A2A3K4 754 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 IFNAR1P17181 557 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 BACE1P56817 501 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 ASPRV1Q53RT3 343 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 KCTD1Q719H9 257 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 CPVLQ9H3G5 476 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 EMILIN3Q9NT22 766 aa25.03■■□□□ 1.6
TPM1-204ENST00000334895 SLC1A4P43007 532 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 PPATQ06203 517 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 SAPCD2Q86UD0 394 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 CCDC82Q8N4S0 544 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 PHKBQ93100 1093 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 OTUD5Q96G74 571 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 GPCPD1Q9NPB8 672 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 TLL2Q9Y6L7 1015 aa25.02■■□□□ 1.6
TPM1-204ENST00000334895 BAZ2BQ9UIF8 2168 aaKnown RBP25.02■■□□□ 1.6
TPM1-204ENST00000334895 FDPSP14324 419 aaKnown RBP25.01■■□□□ 1.59
TPM1-204ENST00000334895 CCDC96Q2M329 555 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 TTBK2Q6IQ55 1244 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 CNTNAP5Q8WYK1 1306 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 KLRF2D3W0D1 207 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 CYTH3O43739 400 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 GJA5P36382 358 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 OPTNQ96CV9 577 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 DDX11Q96FC9 970 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 SMC3Q9UQE7 1217 aa25.01■■□□□ 1.59
TPM1-204ENST00000334895 IRF6O14896 467 aa25■■□□□ 1.59
TPM1-204ENST00000334895 BMP3P12645 472 aa25■■□□□ 1.59
TPM1-204ENST00000334895 GJB2P29033 226 aa25■■□□□ 1.59
TPM1-204ENST00000334895 GNAQP50148 359 aa25■■□□□ 1.59
TPM1-204ENST00000334895 FAM83BQ5T0W9 1011 aa25■■□□□ 1.59
TPM1-204ENST00000334895 GPATCH4Q5T3I0 446 aaKnown RBP25■■□□□ 1.59
TPM1-204ENST00000334895 CPLX2Q6PUV4 134 aaKnown RBP25■■□□□ 1.59
TPM1-204ENST00000334895 CDKL5O76039 1030 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 DDIT3P35638 169 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 USP14P54578 494 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 HMGCS2P54868 508 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 HUNKP57058 714 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 PPIL2Q13356 520 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 LPAR1Q92633 364 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 SLC10A4Q96EP9 437 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 C12orf42Q96LP6 360 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 UBA5Q9GZZ9 404 aa24.99■■□□□ 1.59
TPM1-204ENST00000334895 C19orf81C9J6K1 198 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 FMNL1O95466 1100 aaPredicted RBP24.98■■□□□ 1.59
TPM1-204ENST00000334895 SH3D19Q5HYK7 790 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 LZTS2Q9BRK4 669 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 KCNH4Q9UQ05 1017 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 LOC285556D6RIA3 1793 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 MYH6P13533 1939 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 STK36Q9NRP7 1315 aa24.98■■□□□ 1.59
TPM1-204ENST00000334895 VCAM1P19320 739 aa24.97■■□□□ 1.59
TPM1-204ENST00000334895 SLC16A2P36021 539 aa24.97■■□□□ 1.59
TPM1-204ENST00000334895 SPZ1Q9BXG8 430 aa24.97■■□□□ 1.59
TPM1-204ENST00000334895 SLC26A6Q9BXS9 759 aa24.97■■□□□ 1.59
TPM1-204ENST00000334895 HMGN5P82970 282 aaKnown RBP24.97■■□□□ 1.59
TPM1-204ENST00000334895 RNF26Q9BY78 433 aaPredicted RBP24.97■■□□□ 1.59
TPM1-204ENST00000334895 ORC3Q9UBD5 711 aaPredicted RBP24.97■■□□□ 1.59
TPM1-204ENST00000334895 hCG_1642624A0A1W2PR95 340 aa24.96■■□□□ 1.59
TPM1-204ENST00000334895 RASSF10A6NK89 507 aa24.96■■□□□ 1.59
TPM1-204ENST00000334895 WDR46O15213 610 aaKnown RBP24.96■■□□□ 1.59
TPM1-204ENST00000334895 SMARCA1P28370 1054 aa24.96■■□□□ 1.59
TPM1-204ENST00000334895 SSRP1Q08945 709 aaKnown RBP24.96■■□□□ 1.59
TPM1-204ENST00000334895 WNK4Q96J92 1243 aa24.96■■□□□ 1.59
TPM1-204ENST00000334895 RIOX1Q9H6W3 641 aa24.96■■□□□ 1.59
TPM1-204ENST00000334895 ISY1Q9ULR0 285 aaKnown RBP24.96■■□□□ 1.59
TPM1-204ENST00000334895 A0A0G2JLL6 359 aaPredicted RBP24.95■■□□□ 1.58
TPM1-204ENST00000334895 TMEM232C9JQI7 657 aa24.95■■□□□ 1.58
TPM1-204ENST00000334895 CXCL11O14625 94 aa24.95■■□□□ 1.58
TPM1-204ENST00000334895 PRPF3O43395 683 aaKnown RBP24.95■■□□□ 1.58
TPM1-204ENST00000334895 BTNL9Q6UXG8 535 aa24.95■■□□□ 1.58
TPM1-204ENST00000334895 PRRT2Q7Z6L0 340 aaPredicted RBP24.95■■□□□ 1.58
TPM1-204ENST00000334895 CWC22Q9HCG8 908 aaKnown RBP24.95■■□□□ 1.58
TPM1-204ENST00000334895 V9GY48 417 aaPredicted RBP24.95■■□□□ 1.58
TPM1-204ENST00000334895 PARP14Q460N5 1801 aa24.95■■□□□ 1.58
TPM1-204ENST00000334895 PKN1Q16512 942 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 DEFB115Q30KQ5 88 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 PAXIP1Q6ZW49 1069 aaPredicted RBP24.94■■□□□ 1.58
TPM1-204ENST00000334895 AIFM3Q96NN9 605 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 MOGSQ13724 837 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms