RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MBD4O95243 580 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 CDC25BP30305 580 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 EPHB4P54760 987 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 GOLGA8FQ08AF8 430 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 GOLGA8DPQ0D2H9 430 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 KRT40Q6A162 431 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 SNX29Q8TEQ0 813 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 PHKBQ93100 1093 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 EXOC7Q9UPT5 735 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 ANKRD65E5RJM6 399 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 KRT10P13645 584 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 PPP2R5EQ16537 467 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 CCDC138Q96M89 665 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 BAG5Q9UL15 447 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 TTLL3Q9Y4R7 772 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 CD2APQ9Y5K6 639 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 GCNT3O95395 438 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 SLC8A3P57103 927 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 NNTQ13423 1086 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 PRKG1Q13976 671 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 PPWD1Q96BP3 646 aaKnown RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 CACYBPQ9HB71 228 aaKnown RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 KCNJ14Q9UNX9 436 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 FOXO3O43524 673 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 NAA35Q5VZE5 725 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 RSBN1LQ6PCB5 846 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 TAB3Q8N5C8 712 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 ASXL1Q8IXJ9 1541 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 FAM135AQ9P2D6 1515 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 CWF19L2Q2TBE0 894 aaKnown RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 CCDC92Q53HC0 331 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-201ENST00000334504 NUDCD3Q8IVD9 361 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 TEKT1Q969V4 418 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 FAM227BQ96M60 508 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 EXOC3O60645 756 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 EEF1GP26641 437 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 CASP2P42575 452 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 MYCT1Q8N699 235 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 NOP53Q9NZM5 478 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 VAMP4O75379 141 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 FANCLQ9NW38 375 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 LRWD1Q9UFC0 647 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 PHLPP2Q6ZVD8 1323 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 RIMBP2O15034 1052 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 GYS2P54840 703 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 ADALQ6DHV7 355 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 UIMC1Q96RL1 719 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 EPB41L5Q9HCM4 733 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 SEPT10Q9P0V9 454 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 PTPN22Q9Y2R2 807 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 CTNND1O60716 968 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 STRN3Q13033 797 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 TERF2Q15554 542 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 CHRNA2Q15822 529 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 EAPPQ56P03 285 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 TADA2BQ86TJ2 420 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 IWS1Q96ST2 819 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 MRPL44Q9H9J2 332 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 EPS15L1Q9UBC2 864 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 ANGEL1Q9UNK9 670 aaKnown RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 EFCAB5A4FU69 1503 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 WASLO00401 505 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 GSTA1P08263 222 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 GSTA2P09210 222 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 KRT80Q6KB66 452 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 TBC1D1Q86TI0 1168 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 CCDC117Q8IWD4 279 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-201ENST00000334504 TFCP2L1Q9NZI6 479 aa10.75□□□□□ -0.69
COL4A6-201ENST00000334504 CD109Q6YHK3 1445 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 ASPHQ12797 758 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 FBXO18Q8NFZ0 1043 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 ADGRF5Q8IZF2 1346 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-201ENST00000334504 SCHIP1Q9P0W5 487 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-201ENST00000334504 EPN1Q9Y6I3 576 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-201ENST00000334504 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 KIF22Q14807 665 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 C16orf87Q6PH81 154 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 OGFOD1Q8N543 542 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 GDAP1Q8TB36 358 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 DYDC2Q96IM9 177 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 IRAK4Q9NWZ3 460 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A6-201ENST00000334504 EPRSP07814 1512 aaKnown RBP10.74□□□□□ -0.69
COL4A6-201ENST00000334504 SAT1P21673 171 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 STAT1P42224 750 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 hCG_2014768A0A024R1R8 64 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 SGSM2O43147 1006 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 GNA14O95837 355 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 EHHADHQ08426 723 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms