RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 SRRDQ9UH36 339 aa18.03■□□□□ 0.48
KLHDC3-203ENST00000332245 CPA4Q9UI42 421 aa18.03■□□□□ 0.48
KLHDC3-203ENST00000332245 RLFQ13129 1914 aa18.03■□□□□ 0.48
KLHDC3-203ENST00000332245 F5H6K3 240 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 NDUFB10O96000 172 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 ZKSCAN1P17029 563 aaPredicted RBP18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 KLRC3Q07444 240 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 POTEEQ6S8J3 1075 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 DGKHQ86XP1 1220 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 SH3TC2Q8TF17 1288 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 TRIM47Q96LD4 638 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 NUP88Q99567 741 aaPredicted RBP18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.48
KLHDC3-203ENST00000332245 BRCA2P51587 3418 aa18.02■□□□□ 0.47
KLHDC3-203ENST00000332245 PRC1O43663 620 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 CTGFP29279 349 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 IQCA1Q86XH1 822 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 JAKMIP1Q96N16 626 aaKnown RBP18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 MTA3Q9BTC8 594 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 TMOD4Q9NZQ9 345 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 PARP14Q460N5 1801 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 CYP2C8P10632 490 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 BCRP11274 1271 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 TOP1P11387 765 aaKnown RBP18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 HOXA7P31268 230 aaPredicted RBP18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 MCM5P33992 734 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 KRT32Q14532 448 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 GMCL1P1Q8NEA9 526 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 LPAR1Q92633 364 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 IL17RAQ96F46 866 aa18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
KLHDC3-203ENST00000332245 IFIT3O14879 490 aaKnown RBP18■□□□□ 0.47
KLHDC3-203ENST00000332245 FMNL1O95466 1100 aaPredicted RBP18■□□□□ 0.47
KLHDC3-203ENST00000332245 OSBPP22059 807 aa18■□□□□ 0.47
KLHDC3-203ENST00000332245 CATSPERGQ6ZRH7 1159 aa18■□□□□ 0.47
KLHDC3-203ENST00000332245 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
KLHDC3-203ENST00000332245 LY9Q9HBG7 655 aa18■□□□□ 0.47
KLHDC3-203ENST00000332245 GOPCQ9HD26 462 aa18■□□□□ 0.47
KLHDC3-203ENST00000332245 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■■■□ 20
KLHDC3-203ENST00000332245 FAM83BQ5T0W9 1011 aa17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 SLFN13Q68D06 897 aa17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 DHX32Q7L7V1 743 aaKnown RBP17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 P2RX7Q99572 595 aaKnown RBP17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 ASCC2Q9H1I8 757 aaPredicted RBP17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 ZSWIM6Q9HCJ5 1215 aa17.99■□□□□ 0.47
KLHDC3-203ENST00000332245 RAD21O60216 631 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 PEX10O60683 326 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 MCCP23508 829 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 GRK4P32298 578 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 RAET1EQ8TD07 263 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 KIF2CQ99661 725 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 CEP290O15078 2479 aa17.98■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L15C9J2P7 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L13C9JLJ4 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L11C9JVI0 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L18D6R9N7 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L22D6RA61 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L17D6RBQ6 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L19D6RCP7 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L20D6RJB6 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 WDR46O15213 610 aaKnown RBP17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 SNHG28P0DPA3 235 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 FCGRTP55899 365 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 USP17L24Q0WX57 530 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 IFIT1BQ5T764 474 aaKnown RBP17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 PNMA1Q8ND90 353 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 GMCL1Q96IK5 515 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 WDR19Q8NEZ3 1342 aa17.97■□□□□ 0.47
KLHDC3-203ENST00000332245 GJB1P08034 283 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 PDHBP11177 359 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 ANAPC15P60006 121 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 WTAPQ15007 396 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 BLOC1S2Q6QNY1 142 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 KCTD1Q719H9 257 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 TMEM87BQ96K49 555 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
KLHDC3-203ENST00000332245 MYCP01106 439 aaPredicted RBP17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 CAPN2P17655 700 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 GJA8P48165 433 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 MTFR1Q15390 333 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 C22orf23Q9BZE7 217 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 KAT14Q9H8E8 782 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 SPDYE16A6NNV3 312 aaPredicted RBP17.95■□□□□ 0.46
KLHDC3-203ENST00000332245 BMP3P12645 472 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms