RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 NSUN4Q96CB9 384 aaKnown RBP16.22■□□□□ 0.19
SYNGR1-203ENST00000328933 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
SYNGR1-203ENST00000328933 HOXD10P28358 340 aa16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 STRN3Q13033 797 aa16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 RRAGCQ9HB90 399 aa16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 PCDHA12Q9UN75 941 aa16.21■□□□□ 0.19
SYNGR1-203ENST00000328933 A0A1B0GVL5 298 aa16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 EIF2AK2P19525 551 aaKnown RBP16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 BIRC3Q13489 604 aa16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 GIMAP6Q6P9H5 292 aa16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 LSG1Q9H089 658 aaKnown RBP16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 DISP2A7MBM2 1401 aa16.21■□□□□ 0.18
SYNGR1-203ENST00000328933 EEF2P13639 858 aaKnown RBP16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 TMED8Q6PL24 325 aaPredicted RBP16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 FASTKD5Q7L8L6 764 aaKnown RBP16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 YY1P25490 414 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 STX1AQ16623 288 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 HERC4Q5GLZ8 1057 aaPredicted RBP16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 GTF3C6Q969F1 213 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 SYNCQ9H7C4 482 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 UBE2Q2LH0YL09 131 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 STX17P56962 302 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 FNBP1Q96RU3 617 aa16.2■□□□□ 0.18
SYNGR1-203ENST00000328933 KLRK1P26718 216 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 OTUD6AQ7L8S5 288 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 ADARB2Q9NS39 739 aaKnown RBP16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 CETN2P41208 172 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 SPA17Q15506 151 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 CDC37Q16543 378 aaPredicted RBP16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 SNRNP48Q6IEG0 339 aaKnown RBP16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 NEK8Q86SG6 692 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 F5H6K3 240 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 KLRC3Q07444 240 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 CDC42EP5Q6NZY7 148 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 MACROD2A1Z1Q3 448 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 DGKHQ86XP1 1220 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 RAVER2Q9HCJ3 691 aaKnown RBP16.19■□□□□ 0.18
SYNGR1-203ENST00000328933 ZMYM6O95789 1325 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 CYP4A11Q02928 519 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 HHIPL2Q6UWX4 724 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 DYMQ7RTS9 669 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 SLF1Q9BQI6 1058 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 FBXO33Q7Z6M2 555 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 FAM151AQ8WW52 585 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 TTC14Q96N46 770 aa16.18■□□□□ 0.18
SYNGR1-203ENST00000328933 SFPQP23246 707 aaKnown RBP eCLIP16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 RAET1EQ8TD07 263 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 PGBD1Q96JS3 809 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 TMOD1P28289 359 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 MYCT1Q8N699 235 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 TRAF5O00463 557 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 TMEM47Q9BQJ4 181 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 AKR1B1P15121 316 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 ANKRD13AQ8IZ07 590 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 SERPINA10Q9UK55 444 aa16.17■□□□□ 0.18
SYNGR1-203ENST00000328933 RPAP1Q9BWH6 1393 aaPredicted RBP16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 CCL15-CCL14A0A0B4J2E2 113 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 TNNT1P13805 278 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 RPL13P26373 211 aaKnown RBP16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 ECE1P42892 770 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 MTMR2Q13614 643 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 CCL15Q16663 113 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 STAMQ92783 540 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 ENTPD3O75355 529 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 TXNRD3Q86VQ6 643 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 HACE1Q8IYU2 909 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 DEPTORQ8TB45 409 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 PRMT6Q96LA8 375 aaPredicted RBP16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 TECP42680 631 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms