RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 ANO3Q9BYT9 981 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 PALM2Q8IXS6 379 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 GBP7Q8N8V2 638 aaPredicted RBP17.01■□□□□ 0.31
PTPN21-201ENST00000328736 HAUS8Q9BT25 410 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 AMFRQ9UKV5 643 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 KRT3P12035 628 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 FAM102BQ5T8I3 360 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 ZNF202O95125 648 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 IRX4P78413 519 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 ANKRD20A3Q5VUR7 823 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 METTL13Q8N6R0 699 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 RILPQ96NA2 401 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 CAPN9O14815 690 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 JAK2O60674 1132 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 TROVE2P10155 538 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN21-201ENST00000328736 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
PTPN21-201ENST00000328736 ARHGAP25P42331 645 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 ARHGAP44Q17R89 818 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 SPDYE2Q495Y8 402 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
PTPN21-201ENST00000328736 FAM47CQ5HY64 1035 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 KRT12Q99456 494 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 VCX3AQ9NNX9 186 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 RASSF2P50749 326 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 KBTBD3Q8NAB2 608 aa17■□□□□ 0.31
PTPN21-201ENST00000328736 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
PTPN21-201ENST00000328736 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 KRBA2Q6ZNG9 492 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 GTF3C6Q969F1 213 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 LIG4P49917 911 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 RIC8AQ9NPQ8 531 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 ARHGAP6O43182 974 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 KCNQ3O43525 872 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 INPP5BP32019 993 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 CCDC170Q8IYT3 715 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 TRIM56Q9BRZ2 755 aaKnown RBP16.99■□□□□ 0.31
PTPN21-201ENST00000328736 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
PTPN21-201ENST00000328736 DCAF15Q66K64 600 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 MCF2L2Q86YR7 1114 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
PTPN21-201ENST00000328736 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
PTPN21-201ENST00000328736 RASSF4Q9H2L5 321 aa16.99■□□□□ 0.31
PTPN21-201ENST00000328736 IPO11Q9UI26 975 aaKnown RBP16.99■□□□□ 0.31
PTPN21-201ENST00000328736 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 KRT40Q6A162 431 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 PPFIA1Q13136 1202 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
PTPN21-201ENST00000328736 ST7Q9NRC1 585 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 ZAP70P43403 619 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 TFAP4Q01664 338 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 GCKRQ14397 625 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 BSPRYQ5W0U4 402 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 ANKFY1Q9P2R3 1169 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 RNF40O75150 1001 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 CCDC51Q96ER9 411 aa16.98■□□□□ 0.31
PTPN21-201ENST00000328736 ESYT2A0FGR8 921 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 STAT1P42224 750 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 ZNF75DP51815 510 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 PPP2R5EQ16537 467 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 SMCO2A6NFE2 343 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 TESPA1A2RU30 521 aaPredicted RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 XRCC5P13010 732 aaKnown RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 ITKQ08881 620 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 RAD51AP2Q09MP3 1159 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 PPFIA4O75335 1185 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 POLR2BP30876 1174 aaKnown RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 RFC1P35251 1148 aaPredicted RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 GPBP1Q86WP2 473 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 CTAGE3PQ8IX95 158 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 U2AF1L4Q8WU68 220 aaKnown RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 RPGRIP1Q96KN7 1286 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 PAGR1Q9BTK6 254 aa16.97■□□□□ 0.31
PTPN21-201ENST00000328736 IFIH1Q9BYX4 1025 aaKnown RBP16.97■□□□□ 0.31
PTPN21-201ENST00000328736 TXNDC9O14530 226 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 PPARAQ07869 468 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 C1orf112Q9NSG2 853 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 RBBP5Q15291 538 aaKnown RBP16.96■□□□□ 0.31
PTPN21-201ENST00000328736 SCYL2Q6P3W7 929 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 STAMQ92783 540 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 CABS1Q96KC9 395 aa16.96■□□□□ 0.31
PTPN21-201ENST00000328736 CARD6Q9BX69 1037 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms