RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SPZ1Q9BXG8 430 aa11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 KIAA1683Q9H0B3 1180 aa11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 CSADQ9Y600 493 aa11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 PRPF3O43395 683 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 SYT1P21579 422 aa11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 WASF1Q92558 559 aa11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 RBM27Q9P2N5 1060 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-201ENST00000327028 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 DEXIO95424 95 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 SLC1A4P43007 532 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 SLC35G1Q2M3R5 365 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 ANKRD13AQ8IZ07 590 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 STX6O43752 255 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 RAD21O60216 631 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 BMP3P12645 472 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 FKBP1BP68106 108 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 AKAP17AQ02040 695 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 RGS22Q8NE09 1264 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
VIPAS39-201ENST00000327028 WDR33Q9C0J8 1336 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 PTPRFP10586 1907 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 UNCXA6NJT0 531 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 USP17L10C9JJH3 530 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 BRD1O95696 1058 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 USP14P54578 494 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 PKP1Q13835 747 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 KIAA1755Q5JYT7 1200 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 LPAR1Q92633 364 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 CYTH3O43739 400 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 MTMR2Q13614 643 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 LDLRAD1Q5T700 205 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 RIOX1Q9H6W3 641 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 ZHX2Q9Y6X8 837 aa11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-201ENST00000327028 BAZ2BQ9UIF8 2168 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ZYXQ15942 572 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 PKN1Q16512 942 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 SPICE1Q8N0Z3 855 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 C8orf76Q96K31 380 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ZDHHC9Q9Y397 364 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 AFG3L2Q9Y4W6 797 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 LOC285556D6RIA3 1793 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 BACE1P56817 501 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 SPP2Q13103 211 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 BTNL9Q6UXG8 535 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ERO1BQ86YB8 467 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 C12orf42Q96LP6 360 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 AIFM3Q96NN9 605 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 CPVLQ9H3G5 476 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
VIPAS39-201ENST00000327028 hCG_1642624A0A1W2PR95 340 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 VPS37CA5D8V6 355 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 C19orf81C9J6K1 198 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 H3BQV1 296 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 SCG2P13521 617 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 PPATQ06203 517 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 PFKFB3Q16875 520 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 IFFO2Q5TF58 517 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 PLA2G6O60733 806 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 CELF2O95319 508 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 FOSBP53539 338 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 SYDE2Q5VT97 1194 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 FBXO18Q8NFZ0 1043 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
VIPAS39-201ENST00000327028 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 TMEM232C9JQI7 657 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 KIF3CO14782 793 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 SLC16A2P36021 539 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 PPIL2Q13356 520 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 TRIM29Q14134 588 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 MTMR8Q96EF0 704 aa11.84□□□□□ -0.51
VIPAS39-201ENST00000327028 JMJD4Q9H9V9 463 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms