RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ATAD5Q96QE3 1844 aa17.76■□□□□ 0.43
PRPF3-201ENST00000324862 KIF3CO14782 793 aa17.76■□□□□ 0.43
PRPF3-201ENST00000324862 CELF2O95319 508 aaKnown RBP17.76■□□□□ 0.43
PRPF3-201ENST00000324862 ZNF543Q08ER8 600 aa17.76■□□□□ 0.43
PRPF3-201ENST00000324862 RBM28Q9NW13 759 aaKnown RBP17.76■□□□□ 0.43
PRPF3-201ENST00000324862 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
PRPF3-201ENST00000324862 KIF5BP33176 963 aa17.75■□□□□ 0.43
PRPF3-201ENST00000324862 IREB2P48200 963 aaKnown RBP17.75■□□□□ 0.43
PRPF3-201ENST00000324862 CST9Q5W186 159 aa17.75■□□□□ 0.43
PRPF3-201ENST00000324862 FAM184AQ8NB25 1140 aa17.75■□□□□ 0.43
PRPF3-201ENST00000324862 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
PRPF3-201ENST00000324862 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
PRPF3-201ENST00000324862 SNAP25P60880 206 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 FAM83BQ5T0W9 1011 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
PRPF3-201ENST00000324862 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
PRPF3-201ENST00000324862 GMCL1P1Q8NEA9 526 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 CWC22Q9HCG8 908 aaKnown RBP17.74■□□□□ 0.43
PRPF3-201ENST00000324862 SSRP1Q08945 709 aaKnown RBP17.74■□□□□ 0.43
PRPF3-201ENST00000324862 PKN1Q16512 942 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 CPLX2Q6PUV4 134 aaKnown RBP17.74■□□□□ 0.43
PRPF3-201ENST00000324862 HOMER1Q86YM7 354 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 CSADQ9Y600 493 aa17.74■□□□□ 0.43
PRPF3-201ENST00000324862 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
PRPF3-201ENST00000324862 ZNF280CQ8ND82 737 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 OTOFQ9HC10 1997 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 DOCK1Q14185 1865 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 VPS37CA5D8V6 355 aaPredicted RBP17.73■□□□□ 0.43
PRPF3-201ENST00000324862 HMGCS2P54868 508 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 HMGN5P82970 282 aaKnown RBP17.73■□□□□ 0.43
PRPF3-201ENST00000324862 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
PRPF3-201ENST00000324862 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
PRPF3-201ENST00000324862 ANKRD13AQ8IZ07 590 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 FBXO28Q9NVF7 368 aa17.73■□□□□ 0.43
PRPF3-201ENST00000324862 USP17L10C9JJH3 530 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 TMEM232C9JQI7 657 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 CDKL5O76039 1030 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 MAP3K11Q16584 847 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 PPP4R3BQ5MIZ7 849 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 ALG1Q9BT22 464 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 IRF6O14896 467 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 STX6O43752 255 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 BMP3P12645 472 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 TAL1P17542 331 aaPredicted RBP17.72■□□□□ 0.43
PRPF3-201ENST00000324862 BACE1P56817 501 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 ASPRV1Q53RT3 343 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 GPKOWQ92917 476 aaPredicted RBP eCLIP17.72■□□□□ 0.43
PRPF3-201ENST00000324862 PIGSQ96S52 555 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 GOPCQ9HD26 462 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
PRPF3-201ENST00000324862 MKRN3Q13064 507 aaKnown RBP17.71■□□□□ 0.43
PRPF3-201ENST00000324862 ARMC9Q7Z3E5 817 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 ADGRF4Q8IZF3 695 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 GMCL1Q96IK5 515 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 GBA2Q9HCG7 927 aaPredicted RBP17.71■□□□□ 0.43
PRPF3-201ENST00000324862 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 PAPPA2Q9BXP8 1791 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
PRPF3-201ENST00000324862 LDLRAD1Q5T700 205 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 DCAF4Q8WV16 495 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
PRPF3-201ENST00000324862 JMJD4Q9H9V9 463 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 VPS54Q9P1Q0 977 aa17.71■□□□□ 0.43
PRPF3-201ENST00000324862 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
PRPF3-201ENST00000324862 VCAM1P19320 739 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 GJA5P36382 358 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 ADAMTS3O15072 1205 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
PRPF3-201ENST00000324862 TYW1BQ6NUM6 668 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 OPTNQ96CV9 577 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 GINM1Q9NU53 330 aa17.7■□□□□ 0.42
PRPF3-201ENST00000324862 DEXIO95424 95 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 GNAQP50148 359 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 RIOX1Q9H6W3 641 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 SH2D4AQ9H788 454 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 AS3MTQ9HBK9 375 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 STK36Q9NRP7 1315 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 BRD1O95696 1058 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 YY1P25490 414 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 AKAP17AQ02040 695 aaKnown RBP17.69■□□□□ 0.42
PRPF3-201ENST00000324862 FAM173BQ6P4H8 233 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 C8orf76Q96K31 380 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 SPZ1Q9BXG8 430 aa17.69■□□□□ 0.42
PRPF3-201ENST00000324862 SPDYE5A6NIY4 337 aa17.68■□□□□ 0.42
PRPF3-201ENST00000324862 PPP1R11O60927 126 aaPredicted RBP17.68■□□□□ 0.42
PRPF3-201ENST00000324862 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
PRPF3-201ENST00000324862 H3BQV1 296 aa17.68■□□□□ 0.42
PRPF3-201ENST00000324862 IFFO2Q5TF58 517 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms