RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ZNF274Q96GC6 653 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 CCDC43Q96MW1 224 aaKnown RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 CDCA7Q9BWT1 371 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 CSRNP2Q9H175 543 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 EHD4Q9H223 541 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 L2HGDHQ9H9P8 463 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 MED4Q9NPJ6 270 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ATG3Q9NT62 314 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 SMARCAL1Q9NZC9 954 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 SRP68Q9UHB9 627 aaKnown RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 RIPOR2Q9Y4F9 1068 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 MAST3O60307 1309 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 IKBKBO14920 756 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 FMR1Q06787 632 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 PAK1Q13153 545 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 OSBP2Q969R2 916 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 HELLSQ9NRZ9 838 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 EXOC1Q9NV70 894 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 NWD1Q149M9 1564 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 ANKRD62A6NC57 917 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 NEURL1BA8MQ27 555 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 UBE2Q2LH0YL09 131 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 ZNF185O15231 689 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 GUCY2DQ02846 1103 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 PPFIA1Q13136 1202 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 EZH2Q15910 746 aaKnown RBP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 REXO1L1PQ8IX06 675 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 CSGALNACT2Q8N6G5 542 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 NOC4LQ9BVI4 516 aaKnown RBP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 ODF2LQ9ULJ1 636 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 STK38LQ9Y2H1 464 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 MED1Q15648 1581 aaPredicted RBP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 KCNJ18B7U540 433 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 MAGEA1P43355 309 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 BAG6P46379 1132 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 KCNJ12Q14500 433 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 KCTD19Q17RG1 926 aaPredicted RBP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 RAD9BQ6WBX8 426 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 IQCA1Q86XH1 822 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 NOSTRINQ8IVI9 506 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 IQUBQ8NA54 791 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 MGARPQ8TDB4 240 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 TCP11Q8WWU5 503 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 NCAPGQ9BPX3 1015 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
CDHR3-201ENST00000317716 PCDHB6Q9Y5E3 794 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
CDHR3-201ENST00000317716 MYO1FO00160 1098 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 ZBTB7AO95365 584 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 TTF1Q15361 905 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-201ENST00000317716 USP49Q70CQ1 688 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 OR8K1Q8NGG5 319 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-201ENST00000317716 KIF20BQ96Q89 1820 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 UTRNP46939 3433 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 A0A1B0GUA9 196 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-201ENST00000317716 MAP3K9P80192 1104 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 MORC3Q14149 939 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 LLGL1Q15334 1064 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 RILPL1Q5EBL4 403 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 IFIT1BQ5T764 474 aaKnown RBP8.4□□□□□ -1.06
CDHR3-201ENST00000317716 SHC4Q6S5L8 630 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 SMCR8Q8TEV9 937 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-201ENST00000317716 CXorf56Q9H5V9 222 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 KAT14Q9H8E8 782 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
CDHR3-201ENST00000317716 NIP7Q9Y221 180 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDHR3-201ENST00000317716 CTDNEP1O95476 244 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 SARNPP82979 210 aaKnown RBP8.4□□□□□ -1.07
CDHR3-201ENST00000317716 SOGA3Q5TF21 947 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 LRCH2Q5VUJ6 765 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 NAA35Q5VZE5 725 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 TRIM68Q6AZZ1 485 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 PROCA1Q8NCQ7 364 aaPredicted RBP8.4□□□□□ -1.07
CDHR3-201ENST00000317716 SMARCC2Q8TAQ2 1214 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 SELENOOQ9BVL4 669 aa8.4□□□□□ -1.07
CDHR3-201ENST00000317716 IFIH1Q9BYX4 1025 aaKnown RBP8.4□□□□□ -1.07
CDHR3-201ENST00000317716 B4DLN1 442 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 IFNAR2P48551 515 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 PLCD1P51178 756 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 IKQ13123 557 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 RAPGEF1Q13905 1077 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 KRT71Q3SY84 523 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 RRAGAQ7L523 313 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 HEATR3Q7Z4Q2 680 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CTNNBL1Q8WYA6 563 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 SPAG5Q96R06 1193 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CHP1Q99653 195 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 HAUS7Q99871 368 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 SERPINA10Q9UK55 444 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CPDO75976 1380 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 MROH7-TTC4A0A0A0MT08 1334 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms