RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SYF2O95926 243 aaKnown RBP16.97■□□□□ 0.31
HCFC1-201ENST00000310441 ZNF445P59923 1031 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 COPS6Q7L5N1 327 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 HERC4Q5GLZ8 1057 aaPredicted RBP16.96■□□□□ 0.31
HCFC1-201ENST00000310441 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 C1orf112Q9NSG2 853 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 TCP1P17987 556 aaKnown RBP16.96■□□□□ 0.31
HCFC1-201ENST00000310441 CNOT10Q9H9A5 744 aaKnown RBP16.96■□□□□ 0.31
HCFC1-201ENST00000310441 SCHIP1Q9P0W5 487 aaPredicted RBP16.96■□□□□ 0.31
HCFC1-201ENST00000310441 TPX2Q9ULW0 747 aaKnown RBP16.96■□□□□ 0.31
HCFC1-201ENST00000310441 HYOU1Q9Y4L1 999 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 DMP1Q13316 513 aaPredicted RBP16.96■□□□□ 0.31
HCFC1-201ENST00000310441 GALNT17Q6IS24 598 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 GON4LQ3T8J9 2241 aa16.96■□□□□ 0.31
HCFC1-201ENST00000310441 SSH2Q76I76 1423 aa16.96■□□□□ 0.3
HCFC1-201ENST00000310441 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.3
HCFC1-201ENST00000310441 MYO1AQ9UBC5 1043 aa16.96■□□□□ 0.3
HCFC1-201ENST00000310441 USTQ9Y2C2 406 aa16.96■□□□□ 0.3
HCFC1-201ENST00000310441 IGHDP01880 384 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 CHMLP26374 656 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 RASIP1Q5U651 963 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 SCYL1Q96KG9 808 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 TEX14Q8IWB6 1497 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 CAPN9O14815 690 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 TNNI1P19237 187 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 BEND3Q5T5X7 828 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 CHMP2AO43633 222 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 SLC1A4P43007 532 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
HCFC1-201ENST00000310441 PDXDC1Q6P996 788 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 KLHL7Q8IXQ5 586 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 ATF2P15336 505 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 CFAP61Q8NHU2 1237 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 MGARPQ8TDB4 240 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
HCFC1-201ENST00000310441 BIN2Q9UBW5 565 aaPredicted RBP16.95■□□□□ 0.3
HCFC1-201ENST00000310441 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
HCFC1-201ENST00000310441 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
HCFC1-201ENST00000310441 TEX12Q9BXU0 123 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 STX1BP61266 288 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 PPWD1Q96BP3 646 aaKnown RBP16.94■□□□□ 0.3
HCFC1-201ENST00000310441 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 SNX29Q8TEQ0 813 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 ECE1P42892 770 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 SP4Q02446 784 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 PIK3AP1Q6ZUJ8 805 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.94■□□□□ 0.39e-8■■■■■ 37.9
HCFC1-201ENST00000310441 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
HCFC1-201ENST00000310441 RAPGEF3O95398 923 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 U2AF2P26368 475 aaKnown RBP eCLIP16.94■□□□□ 0.3
HCFC1-201ENST00000310441 BPIFB4P59827 614 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
HCFC1-201ENST00000310441 CARD6Q9BX69 1037 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 BAG2O95816 211 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 TMTC4Q5T4D3 741 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 RPS6KC1Q96S38 1066 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 CFAP74Q9C0B2 1584 aa16.94■□□□□ 0.3
HCFC1-201ENST00000310441 SEPT2Q15019 361 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 MAP7D3Q8IWC1 876 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 BBS5Q8N3I7 341 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 HDAC11Q96DB2 347 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 PPME1Q9Y570 386 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 CD19P15391 556 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 EFCAB13Q8IY85 973 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 AOC3Q16853 763 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 CEP85Q6P2H3 762 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
HCFC1-201ENST00000310441 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
HCFC1-201ENST00000310441 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
HCFC1-201ENST00000310441 PIK3C2GO75747 1445 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 MAN1A2O60476 641 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 GNPTABQ3T906 1256 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
HCFC1-201ENST00000310441 INHBAP08476 426 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 C10orf76Q5T2E6 689 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 FGFR1OP2Q9NVK5 253 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 HNRNPCL2B2RXH8 293 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 HNRNPCL1O60812 293 aaKnown RBP16.93■□□□□ 0.3
HCFC1-201ENST00000310441 ZBED4O75132 1171 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 TNNC2P02585 160 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 PDE6BP35913 854 aa16.93■□□□□ 0.3
HCFC1-201ENST00000310441 YARSP54577 528 aaKnown RBP16.93■□□□□ 0.3
HCFC1-201ENST00000310441 SLMAPQ14BN4 828 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 MAD1L1Q9Y6D9 718 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 KRT19P08727 400 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 ANGPTL2Q9UKU9 493 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 SCOCQ9UIL1 159 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms