RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ENTPD3O75355 529 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 MAEAQ7L5Y9 396 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 DGKHQ86XP1 1220 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 TDRD7Q8NHU6 1098 aaKnown RBP10.43□□□□□ -0.74
PTPRE-202ENST00000306042 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 MAP7D2Q96T17 732 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 DEFB129Q9H1M3 183 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 ZSWIM5Q9P217 1185 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 POLLQ9UGP5 575 aa10.43□□□□□ -0.74
PTPRE-202ENST00000306042 ANO1Q5XXA6 986 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 APOA5Q6Q788 366 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 FBXO33Q7Z6M2 555 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 SLF1Q9BQI6 1058 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 JAK2O60674 1132 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 TAF12Q16514 161 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
PTPRE-202ENST00000306042 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 PRAMEF18Q5VWM3 479 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 SEPT14Q6ZU15 432 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 TPH2Q8IWU9 490 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 FMN2Q9NZ56 1722 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 SLC44A5Q8NCS7 719 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 FAM151AQ8WW52 585 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 ROBO1Q9Y6N7 1651 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 DDNO94850 711 aaPredicted RBP10.42□□□□□ -0.74
PTPRE-202ENST00000306042 CETN2P41208 172 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 HACE1Q8IYU2 909 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 GOLGA6L1Q8N7Z2 621 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 RBM46Q8TBY0 533 aaKnown RBP10.42□□□□□ -0.74
PTPRE-202ENST00000306042 PIGSQ96S52 555 aa10.42□□□□□ -0.74
PTPRE-202ENST00000306042 PNPLA7Q6ZV29 1317 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 INF2Q27J81 1249 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 EEPD1Q7L9B9 569 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 DCAF4Q8WV16 495 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 CDHR1Q96JP9 859 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 TEKT3Q9BXF9 490 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 OSBPL5Q9H0X9 879 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 PFKFB2O60825 505 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 CXCL9Q07325 125 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 SNAPC2Q13487 334 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 SPOUT1Q5T280 376 aaKnown RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 FAM160B1Q5W0V3 765 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 KCNG1Q9UIX4 513 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 MMP14P50281 582 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 HMGCS2P54868 508 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 UBXN2AP68543 259 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 SPA17Q15506 151 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 ME3Q16798 604 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 CDC42EP5Q6NZY7 148 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 SLFN12Q8IYM2 578 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 MNS1Q8NEH6 495 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 RRAGCQ9HB90 399 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 FEM1BQ9UK73 627 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 EXOC7Q9UPT5 735 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 EEF2P13639 858 aaKnown RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 RPL13P26373 211 aaKnown RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 TMOD1P28289 359 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 KIAA1328Q86T90 577 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 NUP88Q99567 741 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-202ENST00000306042 DACT1Q9NYF0 836 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 PCDHA12Q9UN75 941 aa10.41□□□□□ -0.74
PTPRE-202ENST00000306042 hCG_1984214I3L0E3 225 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 PDIA3P30101 505 aaKnown RBP10.4□□□□□ -0.74
PTPRE-202ENST00000306042 ANKRD13AQ8IZ07 590 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 ZNF713Q8N859 430 aaPredicted RBP10.4□□□□□ -0.74
PTPRE-202ENST00000306042 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 PXDNLA1KZ92 1463 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 CCND2P30279 289 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 SLFNL1Q499Z3 407 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 RNF26Q9BY78 433 aaPredicted RBP10.4□□□□□ -0.74
PTPRE-202ENST00000306042 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.74
PTPRE-202ENST00000306042 TNPO2O14787 897 aaKnown RBP10.4□□□□□ -0.75
PTPRE-202ENST00000306042 HDLBPQ00341 1268 aaKnown RBP10.4□□□□□ -0.75
PTPRE-202ENST00000306042 SNRNP48Q6IEG0 339 aaKnown RBP10.4□□□□□ -0.75
PTPRE-202ENST00000306042 TTC16Q8NEE8 873 aa10.4□□□□□ -0.75
PTPRE-202ENST00000306042 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.75
PTPRE-202ENST00000306042 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.75
PTPRE-202ENST00000306042 BICDL2A1A5D9 508 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 N4BP3O15049 544 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 CTR9Q6PD62 1173 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 RSPH3Q86UC2 560 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 SPAG5Q96R06 1193 aa10.39□□□□□ -0.75
PTPRE-202ENST00000306042 SUGCTQ9HAC7 445 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms