RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SNX21Q969T3 373 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 PGBD1Q96JS3 809 aa11.41□□□□□ -0.58
CLIP1-201ENST00000302528 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-201ENST00000302528 RAP1GDS1P52306 607 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 NONOQ15233 471 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLIP1-201ENST00000302528 FAM47CQ5HY64 1035 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 CCDC84Q86UT8 332 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-201ENST00000302528 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 DEPTORQ8TB45 409 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 KCNG1Q9UIX4 513 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ITM2BQ9Y287 266 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 THAP12O43422 761 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 GABPB1Q06547 395 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-201ENST00000302528 RRAGAQ7L523 313 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ARHGAP45Q92619 1136 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 CDKL2Q92772 493 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ANLNQ9NQW6 1124 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-201ENST00000302528 RAD50Q92878 1312 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 LRRD1A4D1F6 860 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 B4E1Z4 1266 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ATF7P17544 494 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ESRRGP62508 458 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ZNF449Q6P9G9 518 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 GLG1Q92896 1179 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 PNMA2Q9UL42 364 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 ABCB4P21439 1286 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 SLC8A1P32418 973 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 USH1GQ495M9 461 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 CEP19Q96LK0 163 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 FAM193BQ96PV7 902 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-201ENST00000302528 MAD1L1Q9Y6D9 718 aa11.4□□□□□ -0.58
CLIP1-201ENST00000302528 GSTA4O15217 222 aa11.4□□□□□ -0.59
CLIP1-201ENST00000302528 KRT25Q7Z3Z0 450 aa11.4□□□□□ -0.59
CLIP1-201ENST00000302528 NELFBQ8WX92 580 aa11.4□□□□□ -0.59
CLIP1-201ENST00000302528 MMS19Q96T76 1030 aa11.4□□□□□ -0.59
CLIP1-201ENST00000302528 NLRC4Q9NPP4 1024 aa11.4□□□□□ -0.59
CLIP1-201ENST00000302528 EPS15L1Q9UBC2 864 aa11.4□□□□□ -0.59
CLIP1-201ENST00000302528 ZBBXA8MT70 800 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 CUTAO60888 179 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 CALCRLQ16602 461 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 UIMC1Q96RL1 719 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 SUCLA2Q9P2R7 463 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 KRIT1O00522 736 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 POLR2BP30876 1174 aaKnown RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 SLC1A4P43007 532 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 LRRC8CQ8TDW0 803 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 HOOK2Q96ED9 719 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 TMEM87BQ96K49 555 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 CLTAP09496 248 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 GNL1P36915 607 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 PRKG1Q13976 671 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 PRPSAP1Q14558 356 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 DDB1Q16531 1140 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 METTL13Q8N6R0 699 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 IL16Q14005 1332 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 CFBP00751 764 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 STAT1P42224 750 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 C8orf34Q49A92 452 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 RAPH1Q70E73 1250 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 OTUD6AQ7L8S5 288 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 TAB3Q8N5C8 712 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 CSRNP1Q96S65 589 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
CLIP1-201ENST00000302528 HESX1Q9UBX0 185 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 TEKT2Q9UIF3 430 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
CLIP1-201ENST00000302528 UFL1O94874 794 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 INTS4Q96HW7 963 aaKnown RBP11.38□□□□□ -0.59
CLIP1-201ENST00000302528 LSM14BQ9BX40 385 aaKnown RBP11.38□□□□□ -0.59
CLIP1-201ENST00000302528 IFT122Q9HBG6 1241 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 OLA1Q9NTK5 396 aaKnown RBP11.38□□□□□ -0.59
CLIP1-201ENST00000302528 IMPACTQ9P2X3 320 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 PRAG1Q86YV5 1406 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 KCNK3O14649 394 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 TNNC2P02585 160 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 NPR1P16066 1061 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 RTEL1Q9NZ71 1219 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 PCDHB13Q9Y5F0 798 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 PZPP20742 1482 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 GOLGA8KD6RF30 607 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 PDE1BQ01064 536 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 TBCCQ15814 346 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 CABP7Q86V35 215 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 NFE2L3Q9Y4A8 694 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 MTX1Q13505 466 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 C2CD5Q86YS7 1000 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 DIS3L2Q8IYB7 885 aaKnown RBP11.38□□□□□ -0.59
CLIP1-201ENST00000302528 MIS12Q9H081 205 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 SAR1BQ9Y6B6 198 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 RCN2Q14257 317 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 NLRX1Q86UT6 975 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 ABTB1Q969K4 478 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms