RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 EEF1GP26641 437 aaKnown RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 STAT1P42224 750 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 TDRD7Q8NHU6 1098 aaKnown RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 VPS37BQ9H9H4 285 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 LRWD1Q9UFC0 647 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 BAIAP2L1Q9UHR4 511 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 ATP7BP35670 1465 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 GCNT3O95395 438 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 PNOCQ13519 176 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 LSM14BQ9BX40 385 aaKnown RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 ABCC12Q96J65 1359 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 DAPK3O43293 454 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 GTPBP6O43824 516 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 HSPA8P11142 646 aaKnown RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 IL9RQ01113 521 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 RRAGAQ7L523 313 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 MIGA1Q8NAN2 632 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 MICAL1Q8TDZ2 1067 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 RILPQ96NA2 401 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 PFKFB1P16118 471 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 SLC12A2P55011 1212 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 DPH6Q7L8W6 267 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 CDCA7Q9BWT1 371 aaPredicted RBP8.4□□□□□ -1.07
SF3B3-201ENST00000302516 RAB20Q9NX57 234 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 IKBKBO14920 756 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 STAM2O75886 525 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 MLH3Q9UHC1 1453 aa8.4□□□□□ -1.07
SF3B3-201ENST00000302516 DDAH1O94760 285 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ANKRD20A4Q4UJ75 823 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ANKRD20A8PQ5CZ79 823 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ANKRD20A2Q5SQ80 823 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ANKRD20A1Q5TYW2 823 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 PDZD4Q76G19 769 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 FAM212AQ96EL1 285 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 HAUS7Q99871 368 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 RFC1P35251 1148 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 PPP1R13BQ96KQ4 1090 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 PFDN6O15212 129 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 BEND3Q5T5X7 828 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 CDC42BPGQ6DT37 1551 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 IQGAP3Q86VI3 1631 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 PLS1Q14651 629 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 IP6K1Q92551 441 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 CSRNP1Q96S65 589 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 TRIM31Q9BZY9 425 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 PPP1R9AQ9ULJ8 1098 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 SBNO2Q9Y2G9 1366 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 GOLGA8CPA6NN73 597 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 OPHN1O60890 802 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 TRAPPC10P48553 1259 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 XAGE2Q96GT9 111 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ZNF277Q9NRM2 450 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 STK38LQ9Y2H1 464 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 RRP15Q9Y3B9 282 aaKnown RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ATF2P15336 505 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 LONP1P36776 959 aaKnown RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 EXOC3O60645 756 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 ANXA1P04083 346 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-201ENST00000302516 SPATA1Q5VX52 437 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 CABP7Q86V35 215 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 LPIN2Q92539 896 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 PCDHB13Q9Y5F0 798 aa8.39□□□□□ -1.07
SF3B3-201ENST00000302516 CHL1O00533 1208 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 TXNDC9O14530 226 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-201ENST00000302516 RUBCNQ92622 972 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 PDE11AQ9HCR9 933 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 PTPRTO14522 1441 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 E7EWF7 191 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 NR1I2O75469 434 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 HSPA6P17066 643 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 GARSP41250 739 aaKnown RBP8.38□□□□□ -1.07
SF3B3-201ENST00000302516 PDE6CP51160 858 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 COG7P83436 770 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-201ENST00000302516 PLIN2Q99541 437 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 VEZTQ9HBM0 779 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 POLR3EQ9NVU0 708 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 CDC23Q9UJX2 597 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 CCDC151A5D8V7 595 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 PRR16Q569H4 304 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 MYOCDQ8IZQ8 938 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 MYCT1Q8N699 235 aa8.38□□□□□ -1.07
SF3B3-201ENST00000302516 TSPYL6Q8N831 410 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms