RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 CEP104O60308 925 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 KRT13P13646 458 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 MAP3K9P80192 1104 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 GUCY2DQ02846 1103 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 E2F5Q15329 346 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 RAB34Q9BZG1 259 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 EFCC1Q9HA90 598 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 CDC27P30260 824 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 TXKP42681 527 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 CCDC51Q96ER9 411 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 TMX4Q9H1E5 349 aaPredicted RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
PDGFD-201ENST00000302251 GGCXP38435 758 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 PDCLQ13371 301 aa13.54□□□□□ -0.24
PDGFD-201ENST00000302251 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 BICDL2A1A5D9 508 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 NDUFA10O95299 355 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 RPSAP08865 295 aaKnown RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 RASGRP4Q8TDF6 673 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 TFR2Q9UP52 801 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 FER1L4A9Z1Z3 1794 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 REXO1L1PQ8IX06 675 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 UHMK1Q8TAS1 419 aaKnown RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
PDGFD-201ENST00000302251 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 MFAP3LO75121 409 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 ZNF76P36508 570 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 KRT31Q15323 416 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 NBPF14Q5TI25 921 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 SELENOOQ9BVL4 669 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
PDGFD-201ENST00000302251 CACNA1FO60840 1977 aa13.52□□□□□ -0.24
PDGFD-201ENST00000302251 MED1Q15648 1581 aaPredicted RBP13.52□□□□□ -0.24
PDGFD-201ENST00000302251 TMEM110-MUSTN1A8MSY1 372 aa13.52□□□□□ -0.24
PDGFD-201ENST00000302251 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.24
PDGFD-201ENST00000302251 OXER1Q8TDS5 423 aa13.52□□□□□ -0.24
PDGFD-201ENST00000302251 FERMT2Q96AC1 680 aa13.52□□□□□ -0.24
PDGFD-201ENST00000302251 TNKSO95271 1327 aa13.52□□□□□ -0.24
PDGFD-201ENST00000302251 PHKG2P15735 406 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 CALML3P27482 149 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 ADAT2Q7Z6V5 191 aaKnown RBP13.52□□□□□ -0.25
PDGFD-201ENST00000302251 NOA1Q8NC60 698 aaKnown RBP13.52□□□□□ -0.25
PDGFD-201ENST00000302251 NOX5Q96PH1 765 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 LCMT1Q9UIC8 334 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
PDGFD-201ENST00000302251 SASH3O75995 380 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.25
PDGFD-201ENST00000302251 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 SPATA5Q8NB90 893 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 TACO1Q9BSH4 297 aaKnown RBP13.52□□□□□ -0.25
PDGFD-201ENST00000302251 ANKIB1Q9P2G1 1089 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 FAM169AQ9Y6X4 670 aa13.52□□□□□ -0.25
PDGFD-201ENST00000302251 TNNI2P48788 182 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 TNNC1P63316 161 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
PDGFD-201ENST00000302251 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 NELFCDQ8IXH7 590 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
PDGFD-201ENST00000302251 CHP1Q99653 195 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 FUT8Q9BYC5 575 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 RPN1P04843 607 aaKnown RBP13.51□□□□□ -0.25
PDGFD-201ENST00000302251 RASSF7Q02833 373 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 GRIN1Q05586 938 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 DIP2AQ14689 1571 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 TSGA10IPQ3SY00 556 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 KRT71Q3SY84 523 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 TADA2BQ86TJ2 420 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 TBC1D31Q96DN5 1066 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 PANX2Q96RD6 677 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 SLC39A2Q9NP94 309 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 H3BQF6 201 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
PDGFD-201ENST00000302251 MMP1P03956 469 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms