RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 POLA2Q14181 598 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 CACTINQ8WUQ7 758 aaKnown RBP23.05■■□□□ 1.28
LTBP3-201ENST00000301873 NT5C3AQ9H0P0 336 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 CSRNP2Q9H175 543 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.05■■□□□ 1.28
LTBP3-201ENST00000301873 ZNF804BA4D1E1 1349 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 ATP7BP35670 1465 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 SNAP23O00161 211 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 BTDP43251 543 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 SPATA1Q5VX52 437 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 TTC14Q96N46 770 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 NAP1L3Q99457 506 aaPredicted RBP23.05■■□□□ 1.28
LTBP3-201ENST00000301873 GOLGA6CA6NDK9 693 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 ACTN4O43707 911 aaKnown RBP23.05■■□□□ 1.28
LTBP3-201ENST00000301873 VIMP08670 466 aaKnown RBP23.05■■□□□ 1.28
LTBP3-201ENST00000301873 GOLGA6DP0CG33 693 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 MSL1Q68DK7 614 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 C11orf57Q6ZUT1 292 aaPredicted RBP23.05■■□□□ 1.28
LTBP3-201ENST00000301873 NLRP10Q86W26 655 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 GPBP1Q86WP2 473 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 MYOCDQ8IZQ8 938 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 LINC00301Q8NCQ3 95 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 GOLGA6AQ9NYA3 693 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 ZSWIM5Q9P217 1185 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 ADD2P35612 726 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 PEX26Q7Z412 305 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 HINFPQ9BQA5 517 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 MED23Q9ULK4 1368 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 DNM2P50570 870 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 SF3A3Q12874 501 aaKnown RBP eCLIP23.04■■□□□ 1.281e-6■■■■□ 22.3
LTBP3-201ENST00000301873 IFT20Q8IY31 132 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 SMYD4Q8IYR2 804 aaPredicted RBP23.04■■□□□ 1.28
LTBP3-201ENST00000301873 TRIML1Q8N9V2 468 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 STK32BQ9NY57 414 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 PPIP5K2O43314 1243 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 ZNF365Q70YC5 407 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 GAS7O60861 476 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 GOLGA8FQ08AF8 430 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 GOLGA8DPQ0D2H9 430 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 MSANTD4Q8NCY6 345 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 TDRD7Q8NHU6 1098 aaKnown RBP23.04■■□□□ 1.28
LTBP3-201ENST00000301873 GJB4Q9NTQ9 266 aa23.04■■□□□ 1.28
LTBP3-201ENST00000301873 PLEKHG1Q9ULL1 1385 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 GOLGA6BA6NDN3 693 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 H7C1D1 291 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 HGSO14964 777 aaPredicted RBP23.03■■□□□ 1.28
LTBP3-201ENST00000301873 KIF23Q02241 960 aaPredicted RBP23.03■■□□□ 1.28
LTBP3-201ENST00000301873 GRAMD1CQ8IYS0 662 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 IGKV5-2P06315 115 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 ABCB4P21439 1286 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 CFAP221Q4G0U5 840 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 DDX41Q9UJV9 622 aaKnown RBP23.03■■□□□ 1.28
LTBP3-201ENST00000301873 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
LTBP3-201ENST00000301873 GTPBP6O43824 516 aaPredicted RBP23.02■■□□□ 1.28
LTBP3-201ENST00000301873 POLR3EQ9NVU0 708 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 ARL1P40616 181 aaPredicted RBP23.02■■□□□ 1.28
LTBP3-201ENST00000301873 CYP4A11Q02928 519 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 CCDC51Q96ER9 411 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 TXNDC16Q9P2K2 825 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 ADGBQ8N7X0 1667 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 CYP2J2P51589 502 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 UAP1Q16222 522 aaPredicted RBP23.02■■□□□ 1.28
LTBP3-201ENST00000301873 SAMD15Q9P1V8 674 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 ASIC3Q9UHC3 531 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 SYNMO15061 1565 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 CYP2D7A0A087X1C5 515 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 APBA3O96018 575 aa23.02■■□□□ 1.28
LTBP3-201ENST00000301873 XRCC5P13010 732 aaKnown RBP23.02■■□□□ 1.28
LTBP3-201ENST00000301873 ARMCX3Q9UH62 379 aaPredicted RBP23.02■■□□□ 1.28
LTBP3-201ENST00000301873 EFCAB6Q5THR3 1501 aa23.02■■□□□ 1.27
LTBP3-201ENST00000301873 LCORLQ8N3X6 602 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 MYO1AQ9UBC5 1043 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 USTQ9Y2C2 406 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 ABCA8O94911 1581 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 RPN1P04843 607 aaKnown RBP23.01■■□□□ 1.27
LTBP3-201ENST00000301873 CD19P15391 556 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 OAS2P29728 719 aaKnown RBP23.01■■□□□ 1.27
LTBP3-201ENST00000301873 ALDH1B1P30837 517 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 RNF26Q9BY78 433 aaPredicted RBP23.01■■□□□ 1.27
LTBP3-201ENST00000301873 STRN3Q13033 797 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 TRPC3Q13507 836 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 UTP11Q9Y3A2 253 aaKnown RBP23.01■■□□□ 1.27
LTBP3-201ENST00000301873 WDR17Q8IZU2 1322 aa23.01■■□□□ 1.27
LTBP3-201ENST00000301873 ERCC5P28715 1186 aaPredicted RBP23■■□□□ 1.27
LTBP3-201ENST00000301873 AGTPBP1Q9UPW5 1226 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 STAT1P42224 750 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 GNL3Q9BVP2 549 aaKnown RBP eCLIP23■■□□□ 1.27
LTBP3-201ENST00000301873 TMOD4Q9NZQ9 345 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 PCDHA1Q9Y5I3 950 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 CYP27B1O15528 508 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 UBL4BQ8N7F7 174 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 LSM14BQ9BX40 385 aaKnown RBP23■■□□□ 1.27
LTBP3-201ENST00000301873 NKIRAS1Q9NYS0 192 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 EXOC7Q9UPT5 735 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 EPN1Q9Y6I3 576 aaPredicted RBP23■■□□□ 1.27
LTBP3-201ENST00000301873 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
LTBP3-201ENST00000301873 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 ATP2B4P23634 1241 aa23■■□□□ 1.27
LTBP3-201ENST00000301873 LRRC45Q96CN5 670 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms