RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 HSD3B7Q9H2F3 369 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 SMARCAL1Q9NZC9 954 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 TRPC5Q9UL62 973 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 LUC7L2Q9Y383 392 aaKnown RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 KCTD19Q17RG1 926 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 RPAINQ86UA6 219 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 TMTC1Q8IUR5 882 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 TMEM139Q8IV31 216 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 SENP2Q9HC62 589 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 KCND1Q9NSA2 647 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 EPN1Q9Y6I3 576 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 ATP1A1P05023 1023 aaKnown RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 GBP2P32456 591 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 PUS3Q9BZE2 481 aaKnown RBP16.67■□□□□ 0.26
SPIDR-201ENST00000297423 PCDHB6Q9Y5E3 794 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 GPAA1O43292 621 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 IRAK1P51617 712 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 KCNQ4P56696 695 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 N4BP2L2Q92802 583 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-201ENST00000297423 GJD4Q96KN9 370 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-201ENST00000297423 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-201ENST00000297423 YY1AP1Q9H869 796 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 ANGEL1Q9UNK9 670 aaKnown RBP16.66■□□□□ 0.26
SPIDR-201ENST00000297423 MFAP3LO75121 409 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 CASP7P55210 303 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 SPA17Q15506 151 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 TUBE1Q9UJT0 475 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 CEP83Q9Y592 693 aa16.66■□□□□ 0.26
SPIDR-201ENST00000297423 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-201ENST00000297423 ZAP70P43403 619 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
SPIDR-201ENST00000297423 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 E7EVH7 732 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 CLGNO14967 610 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-201ENST00000297423 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 ITPK1Q13572 414 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
SPIDR-201ENST00000297423 GOLGA6L10A6NI86 522 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 KRT86O43790 486 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 ADORA1P30542 326 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 PEX19P40855 299 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 PLCD1P51178 756 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 CLNS1AP54105 237 aaKnown RBP16.64■□□□□ 0.25
SPIDR-201ENST00000297423 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 KAT2BQ92831 832 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 PUS7LQ9H0K6 701 aaKnown RBP16.64■□□□□ 0.25
SPIDR-201ENST00000297423 CCNL1Q9UK58 526 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-201ENST00000297423 HPCAL4Q9UM19 191 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 SH3TC1Q8TE82 1336 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 MYO1BO43795 1136 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 PDE8AO60658 829 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 SCP2P22307 547 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 CKAP4Q07065 602 aaKnown RBP16.64■□□□□ 0.25
SPIDR-201ENST00000297423 RESP18Q5W5W9 173 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 NAPBQ9H115 298 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 QTRT2Q9H974 415 aaKnown RBP16.64■□□□□ 0.25
SPIDR-201ENST00000297423 ITGA6P23229 1130 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 PAFAH1B1P43034 410 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 PARP10Q53GL7 1025 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 ZMYM1Q5SVZ6 1142 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 SMCR8Q8TEV9 937 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-201ENST00000297423 TBC1D31Q96DN5 1066 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 CABS1Q96KC9 395 aa16.64■□□□□ 0.25
SPIDR-201ENST00000297423 HGSO14964 777 aaPredicted RBP16.63■□□□□ 0.25
SPIDR-201ENST00000297423 OPA1O60313 960 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 PRDM1O75626 825 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 CFAP58Q5T655 872 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
SPIDR-201ENST00000297423 PLCH1Q4KWH8 1693 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 ESYT3A0FGR9 886 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 SPATA1Q5VX52 437 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 COG1Q8WTW3 980 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 KIF5AQ12840 1032 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 IQCEQ6IPM2 695 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 NOSTRINQ8IVI9 506 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 TANGO6Q9C0B7 1094 aa16.63■□□□□ 0.25
SPIDR-201ENST00000297423 CTSWP56202 376 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 EZH2Q15910 746 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 CEP85LQ5SZL2 805 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 CCDC121Q6ZUS5 278 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 PANX2Q96RD6 677 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 EIF4E1BA6NMX2 242 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 AKR1B10O60218 316 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 MTIF2P46199 727 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 GUCY1A3Q02108 690 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 HNRNPLLQ8WVV9 542 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 ODF2LQ9ULJ1 636 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms