RNA–Protein interactions for RNA: ENST00000290974.6

ZFYVE28-201, Transcript of zinc finger FYVE-type containing 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZFYVE28, Length 4,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-201ENST00000290974 MFAP3LO75121 409 aa16.77■□□□□ 0.27
ZFYVE28-201ENST00000290974 COPB1P53618 953 aaKnown RBP16.77■□□□□ 0.27
ZFYVE28-201ENST00000290974 CC2D1AQ6P1N0 951 aaPredicted RBP16.77■□□□□ 0.27
ZFYVE28-201ENST00000290974 EHBP1Q8NDI1 1231 aa16.77■□□□□ 0.27
ZFYVE28-201ENST00000290974 SEMA3EO15041 775 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 UBE4AQ14139 1066 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 IQCEQ6IPM2 695 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 ADGRG1Q9Y653 693 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 KRT83P78385 493 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 CCDC151A5D8V7 595 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 BMP6P22004 513 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 LONRF2Q1L5Z9 754 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 SLC35F6Q8N357 371 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 EXOC1Q9NV70 894 aa16.76■□□□□ 0.27
ZFYVE28-201ENST00000290974 NLRP3Q96P20 1036 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 VPS18Q9P253 973 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 TSPY3P0CV98 308 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 TSPY8P0CW00 308 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 ZNF18P17022 549 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 CCDC178Q5BJE1 867 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 IRX2Q9BZI1 471 aaPredicted RBP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 BCCIPQ9P287 314 aaKnown RBP eCLIP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 KRT86O43790 486 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 RPN1P04843 607 aaKnown RBP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 RDXP35241 583 aaKnown RBP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 MDM2Q00987 491 aaPredicted RBP16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 AMPD3Q01432 767 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 CCDC122Q5T0U0 273 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 FHOD1Q9Y613 1164 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 ARFGEF2Q9Y6D5 1785 aa16.75■□□□□ 0.27
ZFYVE28-201ENST00000290974 KIAA0754O94854 1291 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 CDR1P51861 262 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 KRT31Q15323 416 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 BLIDQ8IZY5 108 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 ACRBPQ8NEB7 543 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 H7C1D1 291 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 OR8K1Q8NGG5 319 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 HSD3B7Q9H2F3 369 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 PPP1R1BQ9UD71 204 aaPredicted RBP16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 NEFHP12036 1026 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 SARSP49591 514 aaKnown RBP16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 WHAMMP3Q1A5X7 153 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 PHF20Q9BVI0 1012 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 MRPL44Q9H9J2 332 aaKnown RBP16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 ZNF446Q9NWS9 450 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 RWDD2AQ9UIY3 292 aa16.74■□□□□ 0.27
ZFYVE28-201ENST00000290974 LOC102724428A0A0B4J2F2 783 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 GOLGA6L10A6NI86 522 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 BAG3O95817 575 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 ERCC3P19447 782 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 SIK1P57059 783 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 ASIC1P78348 528 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 TBX2Q13207 712 aaPredicted RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 NT5DC1Q5TFE4 455 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 USO1O60763 962 aaKnown RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 ADD3Q9UEY8 706 aaKnown RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 FAM170AA1A519 330 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 CKAP4Q07065 602 aaKnown RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 ATRNO75882 1429 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
ZFYVE28-201ENST00000290974 TFAP4Q01664 338 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 EPN1Q9Y6I3 576 aaPredicted RBP16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 SPEF2Q9C093 1822 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 CDC25AP30304 524 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 TBC1D8BQ0IIM8 1120 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 BICDL2A1A5D9 508 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 ZPR1O75312 459 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 DNAJC21Q5F1R6 531 aaKnown RBP16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 NAPAP54920 295 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 DPYDQ12882 1025 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 RAD9BQ6WBX8 426 aa16.72■□□□□ 0.27
ZFYVE28-201ENST00000290974 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms