RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 ANO10Q9NW15 660 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 USP17L5A8MUK1 530 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 ADAMTS3O15072 1205 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 AP5Z1O43299 807 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 ENTPD3O75355 529 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 RBM5P52756 815 aaKnown RBP eCLIP11.66□□□□□ -0.54
C9orf43-201ENST00000288462 GRIN1Q05586 938 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 TTC38Q5R3I4 469 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 RSBN1LQ6PCB5 846 aaPredicted RBP11.66□□□□□ -0.54
C9orf43-201ENST00000288462 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
C9orf43-201ENST00000288462 CCDC125Q86Z20 511 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
C9orf43-201ENST00000288462 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
C9orf43-201ENST00000288462 GMLQ99445 158 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 MTMR7Q9Y216 660 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 DDTLA6NHG4 134 aaPredicted RBP11.65□□□□□ -0.54
C9orf43-201ENST00000288462 ADCY5O95622 1261 aa11.65□□□□□ -0.54
C9orf43-201ENST00000288462 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.54
C9orf43-201ENST00000288462 IQCB1Q15051 598 aa11.65□□□□□ -0.54
C9orf43-201ENST00000288462 HEATR3Q7Z4Q2 680 aa11.65□□□□□ -0.54
C9orf43-201ENST00000288462 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
C9orf43-201ENST00000288462 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
C9orf43-201ENST00000288462 RIOX1Q9H6W3 641 aa11.65□□□□□ -0.54
C9orf43-201ENST00000288462 ESPNB1AK53 854 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.55
C9orf43-201ENST00000288462 ATP2B1P20020 1258 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 TGFB2P61812 414 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 TCP10Q12799 353 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 PIK3AP1Q6ZUJ8 805 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 RRP36Q96EU6 259 aaKnown RBP11.65□□□□□ -0.55
C9orf43-201ENST00000288462 CPVLQ9H3G5 476 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 RRAGDQ9NQL2 400 aaPredicted RBP11.65□□□□□ -0.55
C9orf43-201ENST00000288462 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.55
C9orf43-201ENST00000288462 FAM13BQ9NYF5 915 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 CCDC39Q9UFE4 941 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 TUBE1Q9UJT0 475 aa11.65□□□□□ -0.55
C9orf43-201ENST00000288462 hCG_1984214I3L0E3 225 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 PSMD14O00487 310 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 TATDN1Q6P1N9 297 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 ZNF713Q8N859 430 aaPredicted RBP11.64□□□□□ -0.55
C9orf43-201ENST00000288462 CCDC12Q8WUD4 166 aaPredicted RBP11.64□□□□□ -0.55
C9orf43-201ENST00000288462 ERCC4Q92889 916 aaPredicted RBP11.64□□□□□ -0.55
C9orf43-201ENST00000288462 ZMYND12Q9H0C1 365 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 CSRNP2Q9H175 543 aa11.64□□□□□ -0.55
C9orf43-201ENST00000288462 TDRD3Q9H7E2 651 aaKnown RBP11.64□□□□□ -0.55
C9orf43-201ENST00000288462 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 ZNF543Q08ER8 600 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
C9orf43-201ENST00000288462 PRMT6Q96LA8 375 aaPredicted RBP11.63□□□□□ -0.55
C9orf43-201ENST00000288462 BPIFA3Q9BQP9 254 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 CLIP2Q9UDT6 1046 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 PCDHA6Q9UN73 950 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 PCDHA8Q9Y5H6 950 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
C9orf43-201ENST00000288462 NLRP12P59046 1061 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 ZNF174Q15697 407 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 LONRF3Q496Y0 759 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 SPECC1Q5M775 1068 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 FRMPD2Q68DX3 1309 aaPredicted RBP11.63□□□□□ -0.55
C9orf43-201ENST00000288462 PIGSQ96S52 555 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 MTFR1LQ9H019 292 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 PIM2Q9P1W9 311 aa11.63□□□□□ -0.55
C9orf43-201ENST00000288462 SEC63Q9UGP8 760 aaKnown RBP11.63□□□□□ -0.55
C9orf43-201ENST00000288462 A0A087WWV3 80 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 MPHOSPH10O00566 681 aaKnown RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 ZBTB7AO95365 584 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 NAPAP54920 295 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 PTGDRQ13258 359 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 DPCR1Q3MIW9 517 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 DHX40Q8IX18 779 aaKnown RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 RASGRP4Q8TDF6 673 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 MKL1Q969V6 931 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 NYAP2Q9P242 653 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 ZNRF3Q9ULT6 936 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 ACTN4O43707 911 aaKnown RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 RAD17O75943 681 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 GPATCH4Q5T3I0 446 aaKnown RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 SARM1Q6SZW1 724 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 HOMER1Q86YM7 354 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms