RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADGRL3Q9HAR2 1447 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 H0YCG3 227 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 TMOD1P28289 359 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 ERCC5P28715 1186 aaPredicted RBP20.56■□□□□ 0.88
PCDH1-201ENST00000287008 NELFBQ8WX92 580 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 BLZF1Q9H2G9 400 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 TTLL1O95922 423 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 SYT10Q6XYQ8 523 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 SERTAD1Q9UHV2 236 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 FAM102BQ5T8I3 360 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 SUSD4Q5VX71 490 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 CYP26C1Q6V0L0 522 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 MAP4K1Q92918 833 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 MASTLQ96GX5 879 aa20.56■□□□□ 0.88
PCDH1-201ENST00000287008 TLR7Q9NYK1 1049 aaKnown RBP20.56■□□□□ 0.88
PCDH1-201ENST00000287008 ARMC9Q7Z3E5 817 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 CTTNBP2NLQ9P2B4 639 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 GCC2Q8IWJ2 1684 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 TLDC2A0PJX2 215 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 MAGEA1P43355 309 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 TERF1P54274 439 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 C6orf163Q5TEZ5 329 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 CCDC26Q8TAB7 109 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 IFT81Q8WYA0 676 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 PRDM15P57071 1507 aaPredicted RBP20.55■□□□□ 0.88
PCDH1-201ENST00000287008 DYNLL1P63167 89 aaKnown RBP20.55■□□□□ 0.88
PCDH1-201ENST00000287008 KLHL30Q0D2K2 578 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 MYOCDQ8IZQ8 938 aa20.55■□□□□ 0.88
PCDH1-201ENST00000287008 ZNF853P0CG23 659 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 YWHAEP62258 255 aaKnown RBP20.54■□□□□ 0.88
PCDH1-201ENST00000287008 FAM178BQ8IXR5 827 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 COA1Q9GZY4 146 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 NRBP2Q9NSY0 501 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 DDX25Q9UHL0 483 aaKnown RBP20.54■□□□□ 0.88
PCDH1-201ENST00000287008 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 DYNC1I1O14576 645 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.54■□□□□ 0.88
PCDH1-201ENST00000287008 TTLL11Q8NHH1 800 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 PI4KBQ9UBF8 816 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 PALD1Q9ULE6 856 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 TPCN1Q9ULQ1 816 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 ADD2P35612 726 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
PCDH1-201ENST00000287008 PROCA1Q8NCQ7 364 aaPredicted RBP20.54■□□□□ 0.88
PCDH1-201ENST00000287008 LIG4P49917 911 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 HS1BP3Q53T59 392 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 USP28Q96RU2 1077 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 NSRP1Q9H0G5 558 aaKnown RBP20.54■□□□□ 0.88
PCDH1-201ENST00000287008 MAP3K4Q9Y6R4 1608 aa20.54■□□□□ 0.88
PCDH1-201ENST00000287008 E7EVH7 732 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 BSDC1Q9NW68 430 aaPredicted RBP20.53■□□□□ 0.88
PCDH1-201ENST00000287008 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 BRD1O95696 1058 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 GNA14O95837 355 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 RBM6P78332 1123 aaKnown RBP20.53■□□□□ 0.88
PCDH1-201ENST00000287008 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 NARFQ9UHQ1 456 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 TMTC1Q8IUR5 882 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 UBL4BQ8N7F7 174 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 TTC14Q96N46 770 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 NBPF3Q9H094 633 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 PIM2Q9P1W9 311 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
PCDH1-201ENST00000287008 COL4A3BPQ9Y5P4 624 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 XRCC5P13010 732 aaKnown RBP20.53■□□□□ 0.88
PCDH1-201ENST00000287008 PDIA3P30101 505 aaKnown RBP20.53■□□□□ 0.88
PCDH1-201ENST00000287008 UTP14CQ5TAP6 766 aaKnown RBP20.53■□□□□ 0.88
PCDH1-201ENST00000287008 GOLGA5Q8TBA6 731 aa20.53■□□□□ 0.88
PCDH1-201ENST00000287008 CYP2J2P51589 502 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 FBXO18Q8NFZ0 1043 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 ADCY9O60503 1353 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 GDF11O95390 407 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 APOA5Q6Q788 366 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 FBF1Q8TES7 1133 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 NUCKS1Q9H1E3 243 aaKnown RBP20.52■□□□□ 0.88
PCDH1-201ENST00000287008 WDR70Q9NW82 654 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 ABCC3O15438 1527 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 NR1I2O75469 434 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 RFX1P22670 979 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 DIXDC1Q155Q3 683 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 PI16Q6UXB8 463 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 RAB3IL1Q8TBN0 382 aa20.52■□□□□ 0.88
PCDH1-201ENST00000287008 ADRA2BP18089 450 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 OSBPP22059 807 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 YARSP54577 528 aaKnown RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 RASA3Q14644 834 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 RNF26Q9BY78 433 aaPredicted RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 CBX8Q9HC52 389 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 BMP3P12645 472 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 PFKFB1P16118 471 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 OSBPL3Q9H4L5 887 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms