RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FRMPD2Q68DX3 1309 aaPredicted RBP21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 PDCP20941 246 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 SMARCA1P28370 1054 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 MOB2Q70IA6 237 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 ZNF280CQ8ND82 737 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 KIAA1683Q9H0B3 1180 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 PAPPA2Q9BXP8 1791 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 PRPF3O43395 683 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 ITGBL1O95965 494 aaPredicted RBP21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 SYT1P21579 422 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 CCDC96Q2M329 555 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 LARP1BQ659C4 914 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 TNPO1Q92973 898 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 FEZ1Q99689 392 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 ZNF408Q9H9D4 720 aa21.94■■□□□ 1.1
PDLIM3-202ENST00000284770 CNTNAP5Q8WYK1 1306 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 USP17L10C9JJH3 530 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 PDIA4P13667 645 aaKnown RBP21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 SPP2Q13103 211 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 KIAA1755Q5JYT7 1200 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 KCTD1Q719H9 257 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 SPZ1Q9BXG8 430 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 GPCPD1Q9NPB8 672 aa21.93■■□□□ 1.1
PDLIM3-202ENST00000284770 UNCXA6NJT0 531 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 CYTH3O43739 400 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 BRD1O95696 1058 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 FKBP1BP68106 108 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 AKAP17AQ02040 695 aaKnown RBP21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 ZYXQ15942 572 aaKnown RBP21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 LDLRAD1Q5T700 205 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 SPICE1Q8N0Z3 855 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 V9GY48 417 aaPredicted RBP21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 DEXIO95424 95 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 BMP3P12645 472 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 USP14P54578 494 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 BACE1P56817 501 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 SLC35G1Q2M3R5 365 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 LPAR1Q92633 364 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 AFG3L2Q9Y4W6 797 aa21.92■■□□□ 1.1
PDLIM3-202ENST00000284770 STX6O43752 255 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 MTMR2Q13614 643 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 WASF1Q92558 559 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 CLMNQ96JQ2 1002 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 NUP88Q99567 741 aaPredicted RBP21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 UBA5Q9GZZ9 404 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 CPVLQ9H3G5 476 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 RBM27Q9P2N5 1060 aaKnown RBP21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 OTOFQ9HC10 1997 aa21.91■■□□□ 1.1
PDLIM3-202ENST00000284770 TRIM75PA6NK02 468 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 UBE2Q2LH0YL09 131 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 KIF3CO14782 793 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 CELF2O95319 508 aaKnown RBP21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 NFKBIBQ15653 356 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 TTBK2Q6IQ55 1244 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 ERO1BQ86YB8 467 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 ALG1Q9BT22 464 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 RIOX1Q9H6W3 641 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 ELP3Q9H9T3 547 aa21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 GBA2Q9HCG7 927 aaPredicted RBP21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 ISY1Q9ULR0 285 aaKnown RBP21.9■■□□□ 1.1
PDLIM3-202ENST00000284770 C19orf81C9J6K1 198 aa21.89■■□□□ 1.1
PDLIM3-202ENST00000284770 PKN1Q16512 942 aa21.89■■□□□ 1.1
PDLIM3-202ENST00000284770 PPATQ06203 517 aa21.89■■□□□ 1.09
PDLIM3-202ENST00000284770 CLEC17AQ6ZS10 378 aa21.89■■□□□ 1.09
PDLIM3-202ENST00000284770 C2orf69Q8N8R5 385 aa21.89■■□□□ 1.09
PDLIM3-202ENST00000284770 EMILIN3Q9NT22 766 aa21.89■■□□□ 1.09
PDLIM3-202ENST00000284770 PHIPQ8WWQ0 1821 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 hCG_1642624A0A1W2PR95 340 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 SPDYE5A6NIY4 337 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 TMEM232C9JQI7 657 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 FAM83BQ5T0W9 1011 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 BTNL9Q6UXG8 535 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 RGS22Q8NE09 1264 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 RBM46Q8TBY0 533 aaKnown RBP21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 AIFM3Q96NN9 605 aa21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 WDR33Q9C0J8 1336 aaKnown RBP21.88■■□□□ 1.09
PDLIM3-202ENST00000284770 SLC16A2P36021 539 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 CST9Q5W186 159 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 ADGRF4Q8IZF3 695 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 CNKSR2Q8WXI2 1034 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 RRP36Q96EU6 259 aaKnown RBP21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 C8orf76Q96K31 380 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 C12orf42Q96LP6 360 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 VAT1LQ9HCJ6 419 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 WDR46O15213 610 aaKnown RBP21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 PFKFB3Q16875 520 aaPredicted RBP21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 FBXO18Q8NFZ0 1043 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 PIBF1Q8WXW3 757 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 JMJD4Q9H9V9 463 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 MTMR6Q9Y217 621 aa21.87■■□□□ 1.09
PDLIM3-202ENST00000284770 VPS37CA5D8V6 355 aaPredicted RBP21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 H3BQV1 296 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 PLA2G6O60733 806 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 SCG2P13521 617 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 STAT2P52630 851 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 SH3D19Q5HYK7 790 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 SLC10A4Q96EP9 437 aa21.86■■□□□ 1.09
PDLIM3-202ENST00000284770 OTUD5Q96G74 571 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms