RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ECM29Q5VYK3 1845 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 TMEM232C9JQI7 657 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
ACER3-201ENST00000278544 TNFAIP1Q13829 316 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 GRM4Q14833 912 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 TATDN1Q6P1N9 297 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 KRT26Q7Z3Y9 468 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 EHD4Q9H223 541 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 LAMB1P07942 1786 aa15.36■□□□□ 0.05
ACER3-201ENST00000278544 SPECC1Q5M775 1068 aa15.36■□□□□ 0.05
ACER3-201ENST00000278544 TMEM179Q6ZVK1 233 aa15.36■□□□□ 0.05
ACER3-201ENST00000278544 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
ACER3-201ENST00000278544 CCDC17Q96LX7 622 aa15.36■□□□□ 0.05
ACER3-201ENST00000278544 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
ACER3-201ENST00000278544 NDUFB10O96000 172 aa15.36■□□□□ 0.05
ACER3-201ENST00000278544 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
ACER3-201ENST00000278544 MAP1SQ66K74 1059 aaPredicted RBP15.36■□□□□ 0.05
ACER3-201ENST00000278544 IGSF3O75054 1194 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 ECM2O94769 699 aaPredicted RBP15.35■□□□□ 0.05
ACER3-201ENST00000278544 SCG2P13521 617 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
ACER3-201ENST00000278544 ME1P48163 572 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 FAM83BQ5T0W9 1011 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 SULF1Q8IWU6 871 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 KIFC2Q96AC6 838 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 PALM3A6NDB9 673 aaPredicted RBP15.35■□□□□ 0.05
ACER3-201ENST00000278544 CAP2P40123 477 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 NAPAP54920 295 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
ACER3-201ENST00000278544 WWC2Q6AWC2 1192 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 MTMR14Q8NCE2 650 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
ACER3-201ENST00000278544 DCPSQ96C86 337 aaKnown RBP15.35■□□□□ 0.05
ACER3-201ENST00000278544 RNF26Q9BY78 433 aaPredicted RBP15.35■□□□□ 0.05
ACER3-201ENST00000278544 CAMK4Q16566 473 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 PIK3AP1Q6ZUJ8 805 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
ACER3-201ENST00000278544 EPHX2P34913 555 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 SPP2Q13103 211 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 SEC63Q9UGP8 760 aaKnown RBP15.34■□□□□ 0.05
ACER3-201ENST00000278544 IGKV6D-41A0A0C4DH26 115 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 WNT7AO00755 349 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 STK38Q15208 465 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 CCDC174Q6PII3 467 aa15.34■□□□□ 0.05
ACER3-201ENST00000278544 LEO1Q8WVC0 666 aaPredicted RBP15.34■□□□□ 0.05
ACER3-201ENST00000278544 ZNF646O15015 1829 aaPredicted RBP15.34■□□□□ 0.05
ACER3-201ENST00000278544 TRAF5O00463 557 aa15.33■□□□□ 0.05
ACER3-201ENST00000278544 PRPF3O43395 683 aaKnown RBP15.33■□□□□ 0.05
ACER3-201ENST00000278544 MMP1P03956 469 aa15.33■□□□□ 0.05
ACER3-201ENST00000278544 MYSM1Q5VVJ2 828 aa15.33■□□□□ 0.05
ACER3-201ENST00000278544 JAKMIP3Q5VZ66 844 aa15.33■□□□□ 0.05
ACER3-201ENST00000278544 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.05
ACER3-201ENST00000278544 MTA3Q9BTC8 594 aa15.33■□□□□ 0.05
ACER3-201ENST00000278544 MYH8P13535 1937 aa15.33■□□□□ 0.05
ACER3-201ENST00000278544 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
ACER3-201ENST00000278544 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
ACER3-201ENST00000278544 ADARB2Q9NS39 739 aaKnown RBP15.33■□□□□ 0.04
ACER3-201ENST00000278544 ZHX2Q9Y6X8 837 aa15.33■□□□□ 0.04
ACER3-201ENST00000278544 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.04
ACER3-201ENST00000278544 PEX10O60683 326 aa15.33■□□□□ 0.04
ACER3-201ENST00000278544 IL27Q8NEV9 243 aa15.33■□□□□ 0.04
ACER3-201ENST00000278544 RRP36Q96EU6 259 aaKnown RBP15.33■□□□□ 0.04
ACER3-201ENST00000278544 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
ACER3-201ENST00000278544 MTMR2Q13614 643 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 CCDC178Q5BJE1 867 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 WASF1Q92558 559 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 XBP1P17861 261 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 ZNF174Q15697 407 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 UBE2SQ16763 222 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 CLIC6Q96NY7 704 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 RRAGCQ9HB90 399 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 TMEM260Q9NX78 707 aa15.32■□□□□ 0.04
ACER3-201ENST00000278544 ZSCAN16Q9H4T2 348 aaPredicted RBP15.31■□□□□ 0.04
ACER3-201ENST00000278544 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 PGAP2Q9UHJ9 254 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
ACER3-201ENST00000278544 ANKS1AQ92625 1134 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 SBF1O95248 1867 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 LIG1P18858 919 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 TANGO6Q9C0B7 1094 aa15.31■□□□□ 0.04
ACER3-201ENST00000278544 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 NOSTRINQ8IVI9 506 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 CLMNQ96JQ2 1002 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 TMEM63CQ9P1W3 806 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 SIPA1L1O43166 1804 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 A0A087WWV3 80 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 SMCO2A6NFE2 343 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 GLTPD2A6NH11 291 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 GRIN3BO60391 1043 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms