RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PDE8BO95263 885 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 KRT2P35908 639 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 HERVK_113P62684 666 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 KRT23Q9C075 422 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 TNKSO95271 1327 aa14.52□□□□□ -0.09
COL8A1-202ENST00000273342 IDEP14735 1019 aa14.52□□□□□ -0.09
COL8A1-202ENST00000273342 EIF5P55010 431 aaKnown RBP14.52□□□□□ -0.09
COL8A1-202ENST00000273342 MAP3K12Q12852 859 aa14.52□□□□□ -0.09
COL8A1-202ENST00000273342 SND1Q7KZF4 910 aaKnown RBP eCLIP14.52□□□□□ -0.09
COL8A1-202ENST00000273342 KRT26Q7Z3Y9 468 aa14.52□□□□□ -0.09
COL8A1-202ENST00000273342 PPM1EQ8WY54 764 aa14.52□□□□□ -0.09
COL8A1-202ENST00000273342 STK36Q9NRP7 1315 aa14.52□□□□□ -0.09
COL8A1-202ENST00000273342 GOLGA6CA6NDK9 693 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 PP2D1A8MPX8 630 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 IRS4O14654 1257 aaPredicted RBP14.51□□□□□ -0.09
COL8A1-202ENST00000273342 PRPF6O94906 941 aaKnown RBP14.51□□□□□ -0.09
COL8A1-202ENST00000273342 GOLGA6DP0CG33 693 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 TTC38Q5R3I4 469 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 KIF6Q6ZMV9 814 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 TRAPPC11Q7Z392 1133 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 GOLGA6AQ9NYA3 693 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 LRP2BPQ9P2M1 347 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 LOC102724159A0A0B4J2E5 919 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 B4DLN1 442 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 BCAMP50895 628 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 EVX2Q03828 476 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 PWP2Q15269 919 aaKnown RBP14.51□□□□□ -0.09
COL8A1-202ENST00000273342 FBXW10Q5XX13 1052 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 OR8K1Q8NGG5 319 aa14.51□□□□□ -0.09
COL8A1-202ENST00000273342 SIPA1L3O60292 1781 aaPredicted RBP14.51□□□□□ -0.09
COL8A1-202ENST00000273342 CCDC196A0A1B0GTZ2 297 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 ZPR1O75312 459 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 PARP1P09874 1014 aaKnown RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 IBSPP21815 317 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 KCTD16Q68DU8 428 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 WDR93Q6P2C0 686 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 SH3RF1Q7Z6J0 888 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 ELOA2Q8IYF1 753 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 ZBTB38Q8NAP3 1195 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 FAM76AQ8TAV0 307 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 ZCRB1Q8TBF4 217 aaKnown RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 BCAS4Q8TDM0 211 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 CCDC51Q96ER9 411 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 CDHR2Q9BYE9 1310 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 GOLGA6BA6NDN3 693 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 EXOC5O00471 708 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 PCCAP05165 728 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 XBP1P17861 261 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 TRIM21P19474 475 aaKnown RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 PKN1Q16512 942 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 ANKRD13CQ8N6S4 541 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 RASGRP4Q8TDF6 673 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 RIC1Q4ADV7 1423 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 AGPSO00116 658 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 NMT2O60551 498 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 WDR59Q6PJI9 974 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 NACAP1Q9BZK3 213 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 LIMA1Q9UHB6 759 aaKnown RBP14.5□□□□□ -0.09
COL8A1-202ENST00000273342 ASAP1Q9ULH1 1129 aa14.5□□□□□ -0.09
COL8A1-202ENST00000273342 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
COL8A1-202ENST00000273342 NKRFO15226 690 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL8A1-202ENST00000273342 CSF1RP07333 972 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 ATP1A2P50993 1020 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 TUBB2AQ13885 445 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 MAP9Q49MG5 647 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 TUBB2BQ9BVA1 445 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 DMGDHQ9UI17 866 aaKnown RBP14.49□□□□□ -0.09
COL8A1-202ENST00000273342 PLEKP08567 350 aaPredicted RBP14.49□□□□□ -0.09
COL8A1-202ENST00000273342 IL17AQ16552 155 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 TICAM2Q86XR7 235 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 IRF2BP1Q8IU81 584 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 DEF6Q9H4E7 631 aa14.49□□□□□ -0.09
COL8A1-202ENST00000273342 RPS6KA5O75582 802 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 RPN1P04843 607 aaKnown RBP14.48□□□□□ -0.09
COL8A1-202ENST00000273342 IRAK1P51617 712 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 CTSWP56202 376 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 GNGT1P63211 74 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 KAT2BQ92831 832 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 LRRC1Q9BTT6 524 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 MYO5AQ9Y4I1 1855 aaKnown RBP14.48□□□□□ -0.09
COL8A1-202ENST00000273342 WTIPA6NIX2 430 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-202ENST00000273342 ZEB2O60315 1214 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 IPO7O95373 1038 aaKnown RBP14.48□□□□□ -0.09
COL8A1-202ENST00000273342 NLRP5P59047 1200 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 SH2D3CQ8N5H7 860 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 MB21D1Q8N884 522 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 HAUS4Q9H6D7 363 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 RWDD2AQ9UIY3 292 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 SRCAPQ6ZRS2 3230 aa14.48□□□□□ -0.09
COL8A1-202ENST00000273342 CYP7A1P22680 504 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 MST1RQ04912 1400 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 CCDC96Q2M329 555 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
COL8A1-202ENST00000273342 CCNI2Q6ZMN8 369 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms