RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TSPY2A6NKD2 308 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 EXOC5O00471 708 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 ZNF185O15231 689 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 ZSCAN26Q16670 478 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 C10orf67Q8IYJ2 551 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 ZNF579Q8NAF0 562 aaKnown RBP18.96■□□□□ 0.63
SQLE-201ENST00000265896 CELF1Q92879 486 aaKnown RBP18.96■□□□□ 0.63
SQLE-201ENST00000265896 PANX2Q96RD6 677 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 USP17L8P0C7I0 530 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 DNA2P51530 1060 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 TICAM2Q86XR7 235 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 SLC44A5Q8NCS7 719 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 CTCFLQ8NI51 663 aaPredicted RBP18.96■□□□□ 0.63
SQLE-201ENST00000265896 RIOK1Q9BRS2 568 aaKnown RBP18.96■□□□□ 0.63
SQLE-201ENST00000265896 CALCOCO1Q9P1Z2 691 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 MACROD2A1Z1Q3 448 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 TUBB4AP04350 444 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 PAK1Q13153 545 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 TYW1BQ6NUM6 668 aa18.96■□□□□ 0.63
SQLE-201ENST00000265896 SMCR8Q8TEV9 937 aaPredicted RBP18.96■□□□□ 0.63
SQLE-201ENST00000265896 GPR101Q96P66 508 aaPredicted RBP18.96■□□□□ 0.63
SQLE-201ENST00000265896 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 TPM1P09493 284 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 STAT6P42226 847 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 BEND6Q5SZJ8 279 aaPredicted RBP18.95■□□□□ 0.62
SQLE-201ENST00000265896 TMTC2Q8N394 836 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 TRIML1Q8N9V2 468 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 IQUBQ8NA54 791 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 TMEM60Q9H2L4 133 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 BRMS1Q9HCU9 246 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 AGPAT5Q9NUQ2 364 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 SLIT2O94813 1529 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 MYH7P12883 1935 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 B4DLN1 442 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 PBX1P40424 430 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 ARHGAP25P42331 645 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 MATR3P43243 847 aaKnown RBP eCLIP18.95■□□□□ 0.628e-7■■■■■ 27.3
SQLE-201ENST00000265896 ATP2B2Q01814 1243 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 ITPK1Q13572 414 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 INF2Q27J81 1249 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 POLD4Q9HCU8 107 aa18.95■□□□□ 0.62
SQLE-201ENST00000265896 REXO2Q9Y3B8 237 aaKnown RBP18.95■□□□□ 0.62
SQLE-201ENST00000265896 USP17L3A6NCW0 530 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 USP17L4A6NCW7 530 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 KCNQ2O43526 872 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 GNAT2P19087 354 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 TCP11X2Q5H9J9 407 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 USP17L1Q7RTZ2 530 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 SH3RF1Q7Z6J0 888 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 MYH2Q9UKX2 1941 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 CTAGE15A4D2H0 777 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 CTAGE8P0CG41 777 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
SQLE-201ENST00000265896 CTAGE6Q86UF2 777 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 CTAGE4Q8IX94 777 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 NAPGQ99747 312 aaPredicted RBP18.94■□□□□ 0.62
SQLE-201ENST00000265896 SMARCAL1Q9NZC9 954 aa18.94■□□□□ 0.62
SQLE-201ENST00000265896 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 UTRNP46939 3433 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 LRRIQ3A6PVS8 624 aaPredicted RBP18.93■□□□□ 0.62
SQLE-201ENST00000265896 RPN1P04843 607 aaKnown RBP18.93■□□□□ 0.62
SQLE-201ENST00000265896 ATP1A1P05023 1023 aaKnown RBP18.93■□□□□ 0.62
SQLE-201ENST00000265896 TMTC3Q6ZXV5 915 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 TXNRD3Q86VQ6 643 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 CNGA4Q8IV77 575 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 GSDMAQ96QA5 445 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 MCM9Q9NXL9 1143 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 COL4A1P02462 1669 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 SPEF2Q9C093 1822 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 LMTK3Q96Q04 1460 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 KRT26Q7Z3Y9 468 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 HEATR3Q7Z4Q2 680 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 LRRC15Q8TF66 581 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 TRIM47Q96LD4 638 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 TRIM34Q9BYJ4 488 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 PRPF3O43395 683 aaKnown RBP18.93■□□□□ 0.62
SQLE-201ENST00000265896 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
SQLE-201ENST00000265896 PDXDC2PQ6P474 469 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 STX8Q9UNK0 236 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
SQLE-201ENST00000265896 RCCD1A6NED2 376 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 PARP1P09874 1014 aaKnown RBP18.92■□□□□ 0.62
SQLE-201ENST00000265896 MECOMQ03112 1051 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 E2F4Q16254 413 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 IRF2BP1Q8IU81 584 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 MMS19Q96T76 1030 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 GNL3LQ9NVN8 582 aaKnown RBP18.92■□□□□ 0.62
SQLE-201ENST00000265896 CNTNAP5Q8WYK1 1306 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 MYH8P13535 1937 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 CCDC151A5D8V7 595 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 ZPR1O75312 459 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 SCG2P13521 617 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 EIF5P55010 431 aaKnown RBP18.92■□□□□ 0.62
SQLE-201ENST00000265896 CCDC122Q5T0U0 273 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 LACRTQ9GZZ8 138 aa18.92■□□□□ 0.62
SQLE-201ENST00000265896 SAP30BPQ9UHR5 308 aaKnown RBP18.92■□□□□ 0.62
SQLE-201ENST00000265896 EPN1Q9Y6I3 576 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms