RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ASPRV1Q53RT3 343 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 GPATCH4Q5T3I0 446 aaKnown RBP10.61□□□□□ -0.71
SSR3-201ENST00000265044 ZFPM1Q8IX07 1006 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 GAKO14976 1311 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 ADCY7P51828 1080 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 GRM4Q14833 912 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 PFKFB3Q16875 520 aaPredicted RBP10.61□□□□□ -0.71
SSR3-201ENST00000265044 TMEM266Q2M3C6 531 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 SMARCE1Q969G3 411 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 KIFC2Q96AC6 838 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 ZHX3Q9H4I2 956 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
SSR3-201ENST00000265044 ADCY5O95622 1261 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 SERPINC1P01008 464 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
SSR3-201ENST00000265044 TMEM179Q6ZVK1 233 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 CCDC39Q9UFE4 941 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 A0A087WWV3 80 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 SPDYE3A6NKU9 549 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 CPXCR1Q8N123 301 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 RAB34Q9BZG1 259 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 SH2D4AQ9H788 454 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 CMA1P23946 247 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 GPR162Q16538 588 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 RASGRP2Q7LDG7 609 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 STAMQ92783 540 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 ZNF70Q9UC06 446 aaPredicted RBP10.6□□□□□ -0.71
SSR3-201ENST00000265044 PCDHA4Q9UN74 947 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 PCDHA1Q9Y5I3 950 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 FAM205CA6NFA0 338 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 KRT18P05783 430 aaKnown RBP10.6□□□□□ -0.71
SSR3-201ENST00000265044 HSP90AA4PQ58FG1 418 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 CCDC174Q6PII3 467 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 KRT25Q7Z3Z0 450 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 FILIP1Q7Z7B0 1213 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 NUP88Q99567 741 aaPredicted RBP10.6□□□□□ -0.71
SSR3-201ENST00000265044 TMEM39BQ9GZU3 492 aa10.6□□□□□ -0.71
SSR3-201ENST00000265044 STAT6P42226 847 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 TXKP42681 527 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 SNAP25P60880 206 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 RASSF7Q02833 373 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 TTBK2Q6IQ55 1244 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 KANK3Q6NY19 840 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 SAMD7Q7Z3H4 446 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 NBPF11Q86T75 865 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 CNOT7Q9UIV1 285 aaKnown RBP10.59□□□□□ -0.71
SSR3-201ENST00000265044 FSD2A1L4K1 749 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 TPM3P06753 285 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 TANGO6Q9C0B7 1094 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 PSTPIP2Q9H939 334 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 PICK1Q9NRD5 415 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 DACH1Q9UI36 760 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 A0A1W2PQ27 194 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 A0A1W2PQ64 194 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 A0A1W2PQD8 194 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 F5H6K3 240 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 KLRC3Q07444 240 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 RASA3Q14644 834 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 TRMT1LQ7Z2T5 733 aaKnown RBP10.59□□□□□ -0.71
SSR3-201ENST00000265044 AOPEPQ8N6M6 819 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 CALML4Q96GE6 196 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 PSMD1Q99460 953 aa10.59□□□□□ -0.71
SSR3-201ENST00000265044 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 SMTNL1A8MU46 457 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 PPP6R2O75170 966 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 ENTPD3O75355 529 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 CFBP00751 764 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 BMP3P12645 472 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 CDC25AP30304 524 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
SSR3-201ENST00000265044 CSRNP2Q9H175 543 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 CNTNAP5Q8WYK1 1306 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 YDJCA8MPS7 323 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 PDHBP11177 359 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.722e-11■■□□□ 12.7
SSR3-201ENST00000265044 NBPF9Q3BBW0 867 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 RRAGBQ5VZM2 374 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 WWC2Q6AWC2 1192 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 IQUBQ8NA54 791 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 MRVI1Q9Y6F6 885 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 GMPSP49915 693 aaPredicted RBP10.58□□□□□ -0.72
SSR3-201ENST00000265044 UVSSAQ2YD98 709 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 FERMT2Q96AC1 680 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 GOLPH3LQ9H4A5 285 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 MYOZ2Q9NPC6 264 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
SSR3-201ENST00000265044 IDEP14735 1019 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 PNOCQ13519 176 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 PRAMEF18Q5VWM3 479 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 AGBL3Q8NEM8 1001 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms