RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 KDRP35968 1356 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 GOLGA6L10A0A0M3HER8 536 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 KIF1CO43896 1103 aaKnown RBP18.13■□□□□ 0.49
GPC1-201ENST00000264039 USP5P45974 858 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 HDLBPQ00341 1268 aaKnown RBP18.13■□□□□ 0.49
GPC1-201ENST00000264039 PIK3AP1Q6ZUJ8 805 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 CCDC170Q8IYT3 715 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 UBXN6Q9BZV1 441 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 METP08581 1390 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
GPC1-201ENST00000264039 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 CD163L1Q9NR16 1453 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 CTNNA1P35221 906 aaKnown RBP18.13■□□□□ 0.49
GPC1-201ENST00000264039 FAM133BQ5BKY9 247 aaKnown RBP18.13■□□□□ 0.49
GPC1-201ENST00000264039 TBC1D1Q86TI0 1168 aaPredicted RBP18.13■□□□□ 0.49
GPC1-201ENST00000264039 APPBP2Q92624 585 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 RPGRIP1Q96KN7 1286 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
GPC1-201ENST00000264039 IFNAR2P48551 515 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 ASIC1P78348 528 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 IFIT5Q13325 482 aaKnown RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 RNPC3Q96LT9 517 aaKnown RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 CCT8L2Q96SF2 557 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 SEPT11Q9NVA2 429 aaKnown RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 MYO1AQ9UBC5 1043 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 GGT7Q9UJ14 662 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 CLSTN1O94985 981 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 AP1ARQ63HQ0 302 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 RRAGAQ7L523 313 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 YIPF3Q9GZM5 350 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 EPHB4P54760 987 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 PAK2Q13177 524 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 PAGE5Q96GU1 130 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 FAM167BQ9BTA0 163 aa18.12■□□□□ 0.49
GPC1-201ENST00000264039 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
GPC1-201ENST00000264039 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
GPC1-201ENST00000264039 LSP1P33241 339 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 RASSF7Q02833 373 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 NBPF3Q9H094 633 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 MS4A14Q96JA4 679 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 CDK5RAP3Q96JB5 506 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 EYA2O00167 538 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 FTCDO95954 541 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 ZFYP08048 801 aaPredicted RBP18.11■□□□□ 0.49
GPC1-201ENST00000264039 TMOD1P28289 359 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 SATB1Q01826 763 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 NLRP14Q86W24 1093 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 LACRTQ9GZZ8 138 aa18.11■□□□□ 0.49
GPC1-201ENST00000264039 NHEJ1Q9H9Q4 299 aaPredicted RBP18.11■□□□□ 0.49
GPC1-201ENST00000264039 EHHADHQ08426 723 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 TBX2Q13207 712 aaPredicted RBP18.1■□□□□ 0.49
GPC1-201ENST00000264039 TRIM14Q14142 442 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 ADAT2Q7Z6V5 191 aaKnown RBP18.1■□□□□ 0.49
GPC1-201ENST00000264039 ZNF473Q8WTR7 871 aaKnown RBP18.1■□□□□ 0.49
GPC1-201ENST00000264039 ARMT1Q9H993 441 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 SLC40A1Q9NP59 571 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 LUC7LQ9NQ29 371 aaKnown RBP18.1■□□□□ 0.49
GPC1-201ENST00000264039 PTGDRQ13258 359 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 NAA35Q5VZE5 725 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 ANKS4BQ8N8V4 417 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 MGARPQ8TDB4 240 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 ZIM3Q96PE6 472 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 CD2APQ9Y5K6 639 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 PTPREP23469 700 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 PARP9Q8IXQ6 854 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 CCDC13Q8IYE1 715 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 VIPAS39Q9H9C1 493 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 AGPAT5Q9NUQ2 364 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 STIM2Q9P246 746 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 PACSIN2Q9UNF0 486 aaPredicted RBP18.1■□□□□ 0.49
GPC1-201ENST00000264039 MYO3AQ8NEV4 1616 aa18.1■□□□□ 0.49
GPC1-201ENST00000264039 ZSCAN5CA6NGD5 496 aaPredicted RBP18.09■□□□□ 0.49
GPC1-201ENST00000264039 CEP104O60308 925 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 MBD4O95243 580 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 GKAP1Q5VSY0 366 aaPredicted RBP18.09■□□□□ 0.49
GPC1-201ENST00000264039 TRIM58Q8NG06 486 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 FAM89AQ96GI7 184 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 SPATS2LQ9NUQ6 558 aaKnown RBP18.09■□□□□ 0.49
GPC1-201ENST00000264039 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 COL15A1P39059 1388 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 RAD21O60216 631 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 KRT2P35908 639 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 CFAP221Q4G0U5 840 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 SPATA4Q8NEY3 305 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 DPH5Q9H2P9 285 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 CUL4BQ13620 913 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms