RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 BARHL2Q9NY43 387 aa27.48■■□□□ 1.99
TSPAN13-201ENST00000262067 DPEP1P16444 411 aa27.48■■□□□ 1.99
TSPAN13-201ENST00000262067 CLCN1P35523 988 aa27.48■■□□□ 1.99
TSPAN13-201ENST00000262067 LRRC47Q8N1G4 583 aaKnown RBP27.48■■□□□ 1.99
TSPAN13-201ENST00000262067 FBXO41Q8TF61 875 aa27.48■■□□□ 1.99
TSPAN13-201ENST00000262067 EHD4Q9H223 541 aa27.48■■□□□ 1.99
TSPAN13-201ENST00000262067 BIN1O00499 593 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 BMP15O95972 392 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 PDHBP11177 359 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 ZRSR1Q15695 479 aaKnown RBP27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 CCDC93Q567U6 631 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 CEP57L1Q8IYX8 460 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 CNNM3Q8NE01 707 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 CLIP2Q9UDT6 1046 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 TRAPPC10P48553 1259 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 DPCR1Q3MIW9 517 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 USP49Q70CQ1 688 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 DHX40Q8IX18 779 aaKnown RBP27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 SLC16A10Q8TF71 515 aa27.47■■□□□ 1.99
TSPAN13-201ENST00000262067 DDTLA6NHG4 134 aaPredicted RBP27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 M0R2N6 131 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 SMARCA1P28370 1054 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 PNOCQ13519 176 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 METTL16Q86W50 562 aaKnown RBP27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 CCDC148Q8NFR7 591 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 RASGRP4Q8TDF6 673 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 DHX36Q9H2U1 1008 aaKnown RBP27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 DNAJC18Q9H819 358 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 TUBE1Q9UJT0 475 aa27.46■■□□□ 1.99
TSPAN13-201ENST00000262067 GOLGA6L19H0YKK7 550 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 TTLL1O95922 423 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 NLRP12P59046 1061 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 GRIPAP1Q4V328 841 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 SH3BP5LQ7L8J4 393 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 RTKN2Q8IZC4 609 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 UBA5Q9GZZ9 404 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 VAT1LQ9HCJ6 419 aa27.45■■□□□ 1.99
TSPAN13-201ENST00000262067 POLR2DO15514 142 aaKnown RBP27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 MSNP26038 577 aaKnown RBP27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 PTGDRQ13258 359 aa27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 RRP36Q96EU6 259 aaKnown RBP27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 NAT10Q9H0A0 1025 aaKnown RBP27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 ZKSCAN5Q9Y2L8 839 aa27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 FRMPD2Q68DX3 1309 aaPredicted RBP27.45■■□□□ 1.98
TSPAN13-201ENST00000262067 MPHOSPH10O00566 681 aaKnown RBP27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 HOMER1Q86YM7 354 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 DAGLBQ8NCG7 672 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 FERMT2Q96AC1 680 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 BECN2A8MW95 431 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 ATP2C1P98194 919 aaPredicted RBP27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 CFAP100Q494V2 611 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 GALNT17Q6IS24 598 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 TDRD3Q9H7E2 651 aaKnown RBP27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 PCDHA6Q9UN73 950 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 PCDHA8Q9Y5H6 950 aa27.44■■□□□ 1.98
TSPAN13-201ENST00000262067 FAM196BA6NMK8 535 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 SNHG28P0DPA3 235 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 MDM2Q00987 491 aaPredicted RBP27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 ISM2Q6H9L7 571 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 ZSCAN29Q8IWY8 852 aaPredicted RBP27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 ELOA2Q8IYF1 753 aaPredicted RBP27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 PIGSQ96S52 555 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 PSMD1Q99460 953 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 RIOX1Q9H6W3 641 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 PI4KBQ9UBF8 816 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 SERTAD1Q9UHV2 236 aa27.43■■□□□ 1.98
TSPAN13-201ENST00000262067 FOXN1O15353 648 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 NPM3O75607 178 aaKnown RBP27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 MCM7P33993 719 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 FOXP4Q8IVH2 680 aaPredicted RBP27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 AOPEPQ8N6M6 819 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 PRMT6Q96LA8 375 aaPredicted RBP27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 CCDC17Q96LX7 622 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 TRIM5Q9C035 493 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 MYH8P13535 1937 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 ASPRV1Q53RT3 343 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 FAM177A1Q8N128 213 aaPredicted RBP27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 PDILTQ8N807 584 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 EPSTI1Q96J88 318 aa27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 ZNF277Q9NRM2 450 aaPredicted RBP27.42■■□□□ 1.98
TSPAN13-201ENST00000262067 ZNF75DP51815 510 aa27.41■■□□□ 1.98
TSPAN13-201ENST00000262067 NAPAP54920 295 aa27.41■■□□□ 1.98
TSPAN13-201ENST00000262067 PLA2G4DQ86XP0 818 aa27.41■■□□□ 1.98
TSPAN13-201ENST00000262067 ZMYND12Q9H0C1 365 aa27.41■■□□□ 1.98
TSPAN13-201ENST00000262067 SEC63Q9UGP8 760 aaKnown RBP27.41■■□□□ 1.98
TSPAN13-201ENST00000262067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.41■■□□□ 1.983e-7■■■■■ 29.7
TSPAN13-201ENST00000262067 CCDC194A0A1B0GVG4 234 aa27.4■■□□□ 1.98
TSPAN13-201ENST00000262067 SPC24Q8NBT2 197 aa27.4■■□□□ 1.98
TSPAN13-201ENST00000262067 LARGE2Q8N3Y3 721 aa27.4■■□□□ 1.98
TSPAN13-201ENST00000262067 BPIFA3Q9BQP9 254 aa27.4■■□□□ 1.98
TSPAN13-201ENST00000262067 GPCPD1Q9NPB8 672 aa27.4■■□□□ 1.98
TSPAN13-201ENST00000262067 PCDHA5Q9Y5H7 936 aa27.4■■□□□ 1.98
TSPAN13-201ENST00000262067 VWA3AA6NCI4 1184 aa27.39■■□□□ 1.98
TSPAN13-201ENST00000262067 RAD17O75943 681 aa27.39■■□□□ 1.98
TSPAN13-201ENST00000262067 ATP2B2Q01814 1243 aa27.39■■□□□ 1.98
TSPAN13-201ENST00000262067 SYMPKQ92797 1274 aaKnown RBP27.39■■□□□ 1.98
TSPAN13-201ENST00000262067 ZNF830Q96NB3 372 aaPredicted RBP27.39■■□□□ 1.98
TSPAN13-201ENST00000262067 SIPA1L1O43166 1804 aa27.39■■□□□ 1.98
TSPAN13-201ENST00000262067 ACTN4O43707 911 aaKnown RBP27.39■■□□□ 1.97
TSPAN13-201ENST00000262067 SHROOM1Q2M3G4 852 aaPredicted RBP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms