RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NBPF3Q9H094 633 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 FAM207AQ9NSI2 230 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 FAM217BQ9NTX9 383 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 MYO6Q9UM54 1294 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 MRFAP1Q9Y605 127 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 FHOD1Q9Y613 1164 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 WDR19Q8NEZ3 1342 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 PP2D1A8MPX8 630 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 B4DLN1 442 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 SRGAP2O75044 1071 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CYP2D6P10635 497 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 PAFAH1B1P43034 410 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 EIF6P56537 245 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 KRT83P78385 493 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CYP27A1Q02318 531 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 BRD3Q15059 726 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 IQCEQ6IPM2 695 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TRIM65Q6PJ69 517 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 DYMQ7RTS9 669 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 ANKRD13CQ8N6S4 541 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 STAG1Q8WVM7 1258 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 JAKMIP2Q96AA8 810 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CPVLQ9H3G5 476 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 ABCB6Q9NP58 842 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 XRN1Q8IZH2 1706 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 A0A0U1RQJ8 604 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CCDC151A5D8V7 595 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CCNT1O60563 726 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 CYP19A1P11511 503 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 ARID4AP29374 1257 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 HIBADHP31937 336 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 TXKP42681 527 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CRKLP46109 303 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 CCDC40Q4G0X9 1142 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 PPP4R3CPQ6ZMV5 832 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 ATRIPQ8WXE1 791 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 UBA5Q9GZZ9 404 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 FAM107BQ9H098 131 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 INTS13Q9NVM9 706 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 ADAM21Q9UKJ8 722 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TFR2Q9UP52 801 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 UBR1Q8IWV7 1749 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 JCADQ9P266 1359 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 FAM208AQ9UK61 1670 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 F8W031 263 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 MPHOSPH10O00566 681 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 ACTN4O43707 911 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 GTPBP6O43824 516 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 PARP1P09874 1014 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 CD44P16070 742 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 IL6STP40189 918 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 KCNJ6P48051 423 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 MAP3K9P80192 1104 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 PARP10Q53GL7 1025 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TYW1BQ6NUM6 668 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TICAM2Q86XR7 235 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 BLIDQ8IZY5 108 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 PNMA1Q8ND90 353 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 PANX2Q96RD6 677 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 CHP1Q99653 195 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TSPYL1Q9H0U9 437 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 BMP2KQ9NSY1 1161 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 HDAC6Q9UBN7 1215 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TRIM10Q9UDY6 481 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 SAR1BQ9Y6B6 198 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 ARHGAP23Q9P227 1491 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 STK36Q9NRP7 1315 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 USP17L8P0C7I0 530 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 TNNI2P48788 182 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 AMPD3Q01432 767 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 RAD51AP2Q09MP3 1159 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 PPP2R5BQ15173 497 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 ALX1Q15699 326 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 EARS2Q5JPH6 523 aaKnown RBP5.32□□□□□ -1.56
USP44-201ENST00000258499 MAPKAPK5Q8IW41 473 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 EHBP1Q8NDI1 1231 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 DYNLL2Q96FJ2 89 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 SETDB2Q96T68 719 aa5.32□□□□□ -1.56
USP44-201ENST00000258499 OVOS2A0A0G2JMS6 1433 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 LOC102724428A0A0B4J2F2 783 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TACC1O75410 805 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 BAG3O95817 575 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 PRDX5P30044 214 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TECP42680 631 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 PRCPP42785 496 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 SIK1P57059 783 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 CKAP4Q07065 602 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 PICALMQ13492 652 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 HLTFQ14527 1009 aaKnown RBP eCLIP5.31□□□□□ -1.56
USP44-201ENST00000258499 NR1I3Q14994 352 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 C2CD5Q86YS7 1000 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 FAM114A1Q8IWE2 563 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 DHX37Q8IY37 1157 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 ZNF579Q8NAF0 562 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 TGFBRAP1Q8WUH2 860 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 ALS2CR12Q96Q35 445 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 SLC39A2Q9NP94 309 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 ABHD10Q9NUJ1 306 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms