RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 SNX14Q9Y5W7 946 aa10.34□□□□□ -0.75
PDE6A-201ENST00000255266 MRVI1Q9Y6F6 885 aa10.34□□□□□ -0.75
PDE6A-201ENST00000255266 MED1Q15648 1581 aaPredicted RBP10.34□□□□□ -0.75
PDE6A-201ENST00000255266 TLR3O15455 904 aaKnown RBP10.34□□□□□ -0.75
PDE6A-201ENST00000255266 IGKV5-2P06315 115 aa10.34□□□□□ -0.75
PDE6A-201ENST00000255266 GTF2A2P52657 109 aa10.34□□□□□ -0.75
PDE6A-201ENST00000255266 TAF1CQ15572 869 aaPredicted RBP10.34□□□□□ -0.75
PDE6A-201ENST00000255266 MYOZ2Q9NPC6 264 aa10.34□□□□□ -0.75
PDE6A-201ENST00000255266 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
PDE6A-201ENST00000255266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDE6A-201ENST00000255266 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 PCDHA1Q9Y5I3 950 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 FMN2Q9NZ56 1722 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 ZNF174Q15697 407 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 BLIDQ8IZY5 108 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 MMP19Q99542 508 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 ABCB11O95342 1321 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 ASB14A6NK59 587 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 PSMD14O00487 310 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 HUNKP57058 714 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 UTP14CQ5TAP6 766 aaKnown RBP10.33□□□□□ -0.76
PDE6A-201ENST00000255266 DHX58Q96C10 678 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 F13A1P00488 732 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 TDRD12Q587J7 1177 aaKnown RBP10.33□□□□□ -0.76
PDE6A-201ENST00000255266 SLC10A5Q5PT55 438 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 ANKRD13AQ8IZ07 590 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 METTL13Q8N6R0 699 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 IFT172Q9UG01 1749 aa10.33□□□□□ -0.76
PDE6A-201ENST00000255266 SCG2P13521 617 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 TXKP42681 527 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 DIXDC1Q155Q3 683 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 CAMK4Q16566 473 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 SNX29Q8TEQ0 813 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 NUP88Q99567 741 aaPredicted RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 OSBPL5Q9H0X9 879 aaPredicted RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 BCL9O00512 1426 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 NEMFO60524 1076 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 AFMP43652 599 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 SH3RF3Q8TEJ3 882 aaPredicted RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 PLVAPQ9BX97 442 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 CEMIPQ8WUJ3 1361 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 UTYO14607 1347 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 TNPO2O14787 897 aaKnown RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 FCER1AP12319 257 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 YY1P25490 414 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 LCORLQ8N3X6 602 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 MB21D1Q8N884 522 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 GGA3Q9NZ52 723 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 GINS2Q9Y248 185 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 FGAP02671 866 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 ZNF70Q9UC06 446 aaPredicted RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 ZSCAN20P17040 1043 aaPredicted RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 PRPHP41219 470 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 DIS3L2Q8IYB7 885 aaKnown RBP10.32□□□□□ -0.76
PDE6A-201ENST00000255266 HAUS2Q9NVX0 235 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 NDUFB9Q9Y6M9 179 aa10.32□□□□□ -0.76
PDE6A-201ENST00000255266 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 GH2P01242 217 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 FCGRTP55899 365 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 KCNV1Q6PIU1 500 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 PANK2Q9BZ23 570 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 ELP3Q9H9T3 547 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 ELP1O95163 1332 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 CTNNA2P26232 953 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 ANGEL2Q5VTE6 544 aaKnown RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 GOLGA5Q8TBA6 731 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 KIFAP3Q92845 792 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 KBTBD13C9JR72 458 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 LAD1O00515 517 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 CYP2E1P05181 493 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 FOXO4P98177 505 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 USP50Q70EL3 339 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 NEK8Q86SG6 692 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 FAM151AQ8WW52 585 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 VWA3AA6NCI4 1184 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 PABPN1LA6NDY0 278 aaKnown RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 CUTAO60888 179 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 HSPA4P34932 840 aa10.31□□□□□ -0.76
PDE6A-201ENST00000255266 PIH1D3Q9NQM4 214 aaKnown RBP10.31□□□□□ -0.76
PDE6A-201ENST00000255266 M0R2C6 588 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 MYL3P08590 195 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 RNF207Q6ZRF8 634 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 LPAR1Q92633 364 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 SPAG5Q96R06 1193 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
PDE6A-201ENST00000255266 ZSCAN12O43309 604 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 PSAPP07602 524 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 SEPT14Q6ZU15 432 aa10.3□□□□□ -0.76
PDE6A-201ENST00000255266 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms