RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZNF804BA4D1E1 1349 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 A0A0D9SFI3 127 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 USP17L21D6R901 530 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 CIAO1O76071 339 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 ATF7P17544 494 aaPredicted RBP9.64□□□□□ -0.87
PTCD3-201ENST00000254630 CFAP57Q96MR6 1250 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
PTCD3-201ENST00000254630 OSBPP22059 807 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 CLCN1P35523 988 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 MORC3Q14149 939 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 FAM47CQ5HY64 1035 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 TAOK1Q7L7X3 1001 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 IQCDQ96DY2 449 aa9.64□□□□□ -0.87
PTCD3-201ENST00000254630 TRPC5Q9UL62 973 aaPredicted RBP9.64□□□□□ -0.87
PTCD3-201ENST00000254630 ZWINTO95229 277 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 TUBBP07437 444 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ERCC3P19447 782 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 KRT81Q14533 505 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.871e-6■■■□□ 17.6
PTCD3-201ENST00000254630 TBC1D31Q96DN5 1066 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 CDC42BPBQ9Y5S2 1711 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ICA1Q05084 483 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GALNT17Q6IS24 598 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ANO3Q9BYT9 981 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GREM2Q9H772 168 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ERVK-7P63135 1459 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 FLOT1O75955 427 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 PDE6AP16499 860 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ABCB5Q2M3G0 1257 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 SRGAP1Q7Z6B7 1085 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 TMTC1Q8IUR5 882 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 MAIP1Q8WWC4 291 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 NUCKS1Q9H1E3 243 aaKnown RBP9.63□□□□□ -0.87
PTCD3-201ENST00000254630 KCNJ18B7U540 433 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 NOL3O60936 208 aaKnown RBP9.63□□□□□ -0.87
PTCD3-201ENST00000254630 NR1I2O75469 434 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 VIMP08670 466 aaKnown RBP9.63□□□□□ -0.87
PTCD3-201ENST00000254630 CD19P15391 556 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 CNGA1P29973 690 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 PTH1RQ03431 593 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 KCNJ12Q14500 433 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ARFGAP2Q8N6H7 521 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 IWS1Q96ST2 819 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 FAM184BQ9ULE4 1060 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 TMEM94Q12767 1356 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 SPHKAPQ2M3C7 1700 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GOLGA6CA6NDK9 693 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GOLGA6BA6NDN3 693 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GOLGA6DP0CG33 693 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 RFX1P22670 979 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 DMP1Q13316 513 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-201ENST00000254630 MTX1Q13505 466 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 POLA2Q14181 598 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 XKR9Q5GH70 373 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 TRMT44Q8IYL2 757 aaKnown RBP9.63□□□□□ -0.87
PTCD3-201ENST00000254630 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GPATCH11Q8N954 259 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 EDC3Q96F86 508 aaKnown RBP9.63□□□□□ -0.87
PTCD3-201ENST00000254630 GOLGA6AQ9NYA3 693 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
PTCD3-201ENST00000254630 N4BP1O75113 896 aaKnown RBP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 GOLGA8HP0CJ92 632 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 ZNF772Q68DY9 489 aaPredicted RBP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 DAAM2Q86T65 1068 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 ASIC3Q9UHC3 531 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PCDHB13Q9Y5F0 798 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 AATKQ6ZMQ8 1374 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 CROCC2H7BZ55 1655 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 CCDC160A6NGH7 325 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 HPDP32754 393 aaPredicted RBP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 ERFEQ4G0M1 354 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 ARAP3Q8WWN8 1544 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 METP08581 1390 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 CEP104O60308 925 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PFKFB2O60825 505 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 OR52Z1P0C646 297 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PIK3CAP42336 1068 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 KIF11P52732 1056 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PPP2R5DQ14738 602 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 SND1Q7KZF4 910 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 KLHL7Q8IXQ5 586 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 GOLGA5Q8TBA6 731 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PFDN4Q9NQP4 134 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 CEP85LQ5SZL2 805 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 RRAGAQ7L523 313 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 NEK8Q86SG6 692 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms