RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RBM46Q8TBY0 533 aaKnown RBP15.02■□□□□ -0
LSM8-201ENST00000249299 ORC3Q9UBD5 711 aaPredicted RBP15.02■□□□□ -0
LSM8-201ENST00000249299 SCAF8Q9UPN6 1271 aaKnown RBP15.02■□□□□ -0
LSM8-201ENST00000249299 C19orf81C9J6K1 198 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 KLRF2D3W0D1 207 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 ECM2O94769 699 aaPredicted RBP15.01□□□□□ -0.01
LSM8-201ENST00000249299 DEXIO95424 95 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 PTPRAP18433 802 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 RXRAP19793 462 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 INPP5BP32019 993 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
LSM8-201ENST00000249299 PRAMEF18Q5VWM3 479 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 GLIS2Q9BZE0 524 aaPredicted RBP15.01□□□□□ -0.01
LSM8-201ENST00000249299 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 CSADQ9Y600 493 aa15.01□□□□□ -0.01
LSM8-201ENST00000249299 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
LSM8-201ENST00000249299 MYH8P13535 1937 aa15□□□□□ -0.01
LSM8-201ENST00000249299 A0A1W2PRG0 241 aa15□□□□□ -0.01
LSM8-201ENST00000249299 JAK2O60674 1132 aa15□□□□□ -0.01
LSM8-201ENST00000249299 FDPSP14324 419 aaKnown RBP15□□□□□ -0.01
LSM8-201ENST00000249299 SLC1A4P43007 532 aa15□□□□□ -0.01
LSM8-201ENST00000249299 ATP2B2Q01814 1243 aa15□□□□□ -0.01
LSM8-201ENST00000249299 LDLRAD1Q5T700 205 aa15□□□□□ -0.01
LSM8-201ENST00000249299 LARP1BQ659C4 914 aaKnown RBP15□□□□□ -0.01
LSM8-201ENST00000249299 SLFN13Q68D06 897 aa15□□□□□ -0.01
LSM8-201ENST00000249299 BTNL9Q6UXG8 535 aa15□□□□□ -0.01
LSM8-201ENST00000249299 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
LSM8-201ENST00000249299 LRRC47Q8N1G4 583 aaKnown RBP15□□□□□ -0.01
LSM8-201ENST00000249299 SPRYD3Q8NCJ5 442 aa15□□□□□ -0.01
LSM8-201ENST00000249299 ZNF280CQ8ND82 737 aa15□□□□□ -0.01
LSM8-201ENST00000249299 RIOX1Q9H6W3 641 aa15□□□□□ -0.01
LSM8-201ENST00000249299 NMRK2Q9NPI5 230 aa15□□□□□ -0.01
LSM8-201ENST00000249299 USP17L10C9JJH3 530 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 hCG_1984214I3L0E3 225 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 MAP3K13O43283 966 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 STX6O43752 255 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 NDUFB10O96000 172 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 XBP1P17861 261 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 SYT1P21579 422 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 BACE1P56817 501 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 SHROOM1Q2M3G4 852 aaPredicted RBP14.99□□□□□ -0.01
LSM8-201ENST00000249299 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.99□□□□□ -0.01
LSM8-201ENST00000249299 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 SRBD1Q8N5C6 995 aaKnown RBP14.99□□□□□ -0.01
LSM8-201ENST00000249299 ZNF713Q8N859 430 aaPredicted RBP14.99□□□□□ -0.01
LSM8-201ENST00000249299 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
LSM8-201ENST00000249299 BRD1O95696 1058 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 BMP3P12645 472 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 PPATQ06203 517 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 TRAF1Q13077 416 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 VGLL4Q14135 290 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 MAP1SQ66K74 1059 aaPredicted RBP14.98□□□□□ -0.01
LSM8-201ENST00000249299 LHX8Q68G74 356 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 USP17L2Q6R6M4 530 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 ERO1BQ86YB8 467 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 RAB11FIP4Q86YS3 637 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 CLEC10AQ8IUN9 316 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 ACER1Q8TDN7 264 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 CHURC1Q8WUH1 139 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 RNF25Q96BH1 459 aaPredicted RBP14.98□□□□□ -0.01
LSM8-201ENST00000249299 SLC26A6Q9BXS9 759 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 SH3GLB2Q9NR46 395 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 CNTNAP5Q8WYK1 1306 aa14.98□□□□□ -0.01
LSM8-201ENST00000249299 CXCL11O14625 94 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 WDR46O15213 610 aaKnown RBP14.97□□□□□ -0.01
LSM8-201ENST00000249299 PLEKHA8P1O95397 391 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 POTEJP0CG39 1038 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 FDX1P10109 184 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 ECE1P42892 770 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 SH3D19Q5HYK7 790 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 FAM160B2Q86V87 743 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 STAG2Q8N3U4 1231 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 FBXO18Q8NFZ0 1043 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 ZKSCAN4Q969J2 545 aaPredicted RBP14.97□□□□□ -0.01
LSM8-201ENST00000249299 MTMR8Q96EF0 704 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 FEZ1Q99689 392 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 GPBP1L1Q9HC44 474 aaPredicted RBP14.97□□□□□ -0.01
LSM8-201ENST00000249299 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 AFG3L2Q9Y4W6 797 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 ATP6V1DQ9Y5K8 247 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 SNCAIPQ9Y6H5 919 aa14.97□□□□□ -0.01
LSM8-201ENST00000249299 SPDYE5A6NIY4 337 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
LSM8-201ENST00000249299 TRIM29Q14134 588 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
LSM8-201ENST00000249299 CCDC96Q2M329 555 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 GALNT17Q6IS24 598 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 PHKBQ93100 1093 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 RRP36Q96EU6 259 aaKnown RBP14.96□□□□□ -0.01
LSM8-201ENST00000249299 C8orf76Q96K31 380 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 ALG1Q9BT22 464 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 ZSCAN16Q9H4T2 348 aaPredicted RBP14.96□□□□□ -0.01
LSM8-201ENST00000249299 PNMA2Q9UL42 364 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
LSM8-201ENST00000249299 V9GY48 417 aaPredicted RBP14.96□□□□□ -0.01
LSM8-201ENST00000249299 H3BQV1 296 aa14.95□□□□□ -0.02
LSM8-201ENST00000249299 CYTH3O43739 400 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms