RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 GDAQ9Y2T3 454 aa28.97■■■□□ 2.23
RAB40C-201ENST00000248139 DZIP1Q86YF9 867 aaKnown RBP28.97■■■□□ 2.23
RAB40C-201ENST00000248139 ZBTB9Q96C00 473 aa28.97■■■□□ 2.23
RAB40C-201ENST00000248139 LAMB2P55268 1798 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 A0A1B0GUL6 1792 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 ABL1P00519 1130 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 TUBB4AP04350 444 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 CCDC34Q96HJ3 373 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 PDXDC2PQ6P474 469 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 ZNF771Q7L3S4 317 aaPredicted RBP28.96■■■□□ 2.23
RAB40C-201ENST00000248139 IQUBQ8NA54 791 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 KIFC2Q96AC6 838 aa28.96■■■□□ 2.23
RAB40C-201ENST00000248139 TEX35Q5T0J7 233 aa28.95■■■□□ 2.23
RAB40C-201ENST00000248139 CCDC12Q8WUD4 166 aaPredicted RBP28.95■■■□□ 2.23
RAB40C-201ENST00000248139 TAB2Q9NYJ8 693 aa28.95■■■□□ 2.23
RAB40C-201ENST00000248139 FHOD1Q9Y613 1164 aa28.95■■■□□ 2.23
RAB40C-201ENST00000248139 GNPATO15228 680 aa28.95■■■□□ 2.22
RAB40C-201ENST00000248139 TFRCP02786 760 aaKnown RBP28.95■■■□□ 2.22
RAB40C-201ENST00000248139 KAT14Q9H8E8 782 aa28.95■■■□□ 2.22
RAB40C-201ENST00000248139 ATP8A2Q9NTI2 1148 aa28.95■■■□□ 2.22
RAB40C-201ENST00000248139 SH3RF3Q8TEJ3 882 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-201ENST00000248139 EEF2KMTQ96G04 330 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 SCN7AQ01118 1682 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 GYPCP04921 128 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 GOLGA8HP0CJ92 632 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 MAP3K9P80192 1104 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 KRT31Q15323 416 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 SLC35G1Q2M3R5 365 aa28.94■■■□□ 2.22
RAB40C-201ENST00000248139 PBX1P40424 430 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 USP5P45974 858 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 SLC10A5Q5PT55 438 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 PNMA1Q8ND90 353 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 FAM53CQ9NYF3 392 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 SAP30BPQ9UHR5 308 aaKnown RBP28.93■■■□□ 2.22
RAB40C-201ENST00000248139 BMP15O95972 392 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 RREB1Q92766 1687 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 ADGRG1Q9Y653 693 aa28.93■■■□□ 2.22
RAB40C-201ENST00000248139 TRIM49BA6NDI0 452 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 N4BP3O15049 544 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 PPP2R3AQ06190 1150 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 BLIDQ8IZY5 108 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 ACRBPQ8NEB7 543 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 ARPP21Q9UBL0 812 aaPredicted RBP28.92■■■□□ 2.22
RAB40C-201ENST00000248139 TMEM60Q9H2L4 133 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 CASZ1Q86V15 1759 aa28.92■■■□□ 2.22
RAB40C-201ENST00000248139 CCDC175P0C221 793 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 PCP11498 1178 aaKnown RBP28.91■■■□□ 2.22
RAB40C-201ENST00000248139 NOL10Q9BSC4 688 aaKnown RBP28.91■■■□□ 2.22
RAB40C-201ENST00000248139 ANKIB1Q9P2G1 1089 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 MRFAP1Q9Y605 127 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 MFAP3LO75121 409 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 PNMA6AP0CW24 399 aaPredicted RBP28.91■■■□□ 2.22
RAB40C-201ENST00000248139 C4orf32Q8N8J7 132 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 NELFBQ8WX92 580 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 MKNK2Q9HBH9 465 aa28.91■■■□□ 2.22
RAB40C-201ENST00000248139 PIP4K2BP78356 416 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 TGFBRAP1Q8WUH2 860 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 PANX2Q96RD6 677 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 STX8Q9UNK0 236 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 EFCAB8A8MWE9 144 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 SEMA3EO15041 775 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 ZPR1O75312 459 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 TM4SF1P30408 202 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 NFIXQ14938 502 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 INF2Q27J81 1249 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 FILIP1LQ4L180 1135 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 RASSF8Q8NHQ8 419 aa28.9■■■□□ 2.22
RAB40C-201ENST00000248139 CYTH3O43739 400 aa28.89■■■□□ 2.22
RAB40C-201ENST00000248139 PRCPP42785 496 aa28.89■■■□□ 2.22
RAB40C-201ENST00000248139 HEATR3Q7Z4Q2 680 aa28.89■■■□□ 2.22
RAB40C-201ENST00000248139 NARFQ9UHQ1 456 aa28.89■■■□□ 2.22
RAB40C-201ENST00000248139 RPN1P04843 607 aaKnown RBP28.88■■■□□ 2.21
RAB40C-201ENST00000248139 BMS1Q14692 1282 aaKnown RBP28.88■■■□□ 2.21
RAB40C-201ENST00000248139 C12orf60Q5U649 245 aa28.88■■■□□ 2.21
RAB40C-201ENST00000248139 PUF60Q9UHX1 559 aaKnown RBP28.88■■■□□ 2.21
RAB40C-201ENST00000248139 STAT6P42226 847 aa28.88■■■□□ 2.21
RAB40C-201ENST00000248139 TMCO3Q6UWJ1 677 aa28.88■■■□□ 2.21
RAB40C-201ENST00000248139 MAPKAPK5Q8IW41 473 aa28.88■■■□□ 2.21
RAB40C-201ENST00000248139 SRRTQ9BXP5 876 aaKnown RBP28.88■■■□□ 2.21
RAB40C-201ENST00000248139 GOLGA6L9A6NEM1 432 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 KIF5BP33176 963 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 PMS1P54277 932 aaKnown RBP28.87■■■□□ 2.21
RAB40C-201ENST00000248139 PAK1Q13153 545 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 TERF2Q15554 542 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 SBK1Q52WX2 424 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 ANKRD2Q9GZV1 360 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 GTPBP6O43824 516 aaPredicted RBP28.87■■■□□ 2.21
RAB40C-201ENST00000248139 PLA2G4AP47712 749 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 ERVK-24P63145 666 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 WWC2Q6AWC2 1192 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 TPTE2Q6XPS3 522 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 MAD2L2Q9UI95 211 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 MYH8P13535 1937 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 PES1O00541 588 aaKnown RBP28.87■■■□□ 2.21
RAB40C-201ENST00000248139 ZNF569Q5MCW4 686 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 LRRC15Q8TF66 581 aa28.87■■■□□ 2.21
RAB40C-201ENST00000248139 LDHBP07195 334 aaKnown RBP28.86■■■□□ 2.21
RAB40C-201ENST00000248139 COPB1P53618 953 aaKnown RBP28.86■■■□□ 2.21
RAB40C-201ENST00000248139 BARGINQ6ZT62 677 aa28.86■■■□□ 2.21
RAB40C-201ENST00000248139 CTAGE1Q96RT6 745 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms