RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
EXOSC9-201ENST00000243498 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
EXOSC9-201ENST00000243498 NID2Q14112 1375 aa10.6□□□□□ -0.71
EXOSC9-201ENST00000243498 SPDYE16A6NNV3 312 aaPredicted RBP10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 SMIM22K7EJ46 135 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 COL9A3Q14050 684 aaPredicted RBP10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 ANGEL2Q5VTE6 544 aaKnown RBP10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 LARP1BQ659C4 914 aaKnown RBP10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 SULF1Q8IWU6 871 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 SMARCC2Q8TAQ2 1214 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 DDX12PQ92771 950 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 SYNPO2Q9UMS6 1093 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 ATP6V1DQ9Y5K8 247 aa10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 WDR33Q9C0J8 1336 aaKnown RBP10.59□□□□□ -0.71
EXOSC9-201ENST00000243498 SHTN1A0MZ66 631 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 SIPA1L1O43166 1804 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 AKR1B1P15121 316 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 EPHX2P34913 555 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 NOVP48745 357 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 MAP3K10Q02779 954 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 SSRP1Q08945 709 aaKnown RBP10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 CEP95Q96GE4 821 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 TMEM47Q9BQJ4 181 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 ZNF341Q9BYN7 854 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 TMEM39BQ9GZU3 492 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 SH2D4AQ9H788 454 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 ARHGEF10LQ9HCE6 1279 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 MTMR4Q9NYA4 1195 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 NYAP2Q9P242 653 aa10.58□□□□□ -0.72
EXOSC9-201ENST00000243498 MYH4Q9Y623 1939 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 STK36Q9NRP7 1315 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 PTPDC1A2A3K4 754 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 H3BQV1 296 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 ASNSP08243 561 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 IFNAR1P17181 557 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 XBP1P17861 261 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 SMARCA1P28370 1054 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 NF2P35240 595 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 DDIT3P35638 169 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 TROAPQ12815 778 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 RCSD1Q6JBY9 416 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 PAXIP1Q6ZW49 1069 aaPredicted RBP10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 NSUN7Q8NE18 718 aaKnown RBP10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 TRPM4Q8TD43 1214 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 MKL1Q969V6 931 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 RNF26Q9BY78 433 aaPredicted RBP10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 GGA3Q9NZ52 723 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 HPS5Q9UPZ3 1129 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 MYH6P13533 1939 aa10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
EXOSC9-201ENST00000243498 POLR2AP24928 1970 aaKnown RBP10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 IGKV6D-41A0A0C4DH26 115 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 STX6O43752 255 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 NMT2O60551 498 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 EGFRP00533 1210 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 PARP1P09874 1014 aaKnown RBP10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 CAP2P40123 477 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 ICA1Q05084 483 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 TRIM29Q14134 588 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 E2F4Q16254 413 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 DNAJC18Q9H819 358 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 WDR70Q9NW82 654 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 ORC3Q9UBD5 711 aaPredicted RBP10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 CLIP2Q9UDT6 1046 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
EXOSC9-201ENST00000243498 PPP1R12BO60237 982 aaPredicted RBP10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 CTNND1O60716 968 aaKnown RBP10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 DEXIO95424 95 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 SYT1P21579 422 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 HIRAP54198 1017 aaPredicted RBP10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 ATP2B2Q01814 1243 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 ST3GAL1Q11201 340 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 NBR1Q14596 966 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 GRM4Q14833 912 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 RAB3GAP1Q15042 981 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 ASPRV1Q53RT3 343 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 MIGA2Q7L4E1 593 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 CCDC144CPQ8IYA2 1237 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 DDX11Q96FC9 970 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 TEPSINQ96N21 525 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 MYL10Q9BUA6 226 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 AS3MTQ9HBK9 375 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 PGAP2Q9UHJ9 254 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 FAM196BA6NMK8 535 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 GOLGA6L22H0YM25 854 aa10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 PRPF3O43395 683 aaKnown RBP10.55□□□□□ -0.72
EXOSC9-201ENST00000243498 GDF11O95390 407 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms