RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 DDX60LQ5H9U9 1706 aaKnown RBP13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 M0R2N6 131 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 KRT31Q15323 416 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 ERICH2A1L162 156 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 JAKMIP3Q5VZ66 844 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 CCDC51Q96ER9 411 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 SLC5A1P13866 664 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 CYP7A1P22680 504 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 CDC25AP30304 524 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 IL6STP40189 918 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 ZNF507Q8TCN5 953 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 LRRC15Q8TF66 581 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 EXOC4Q96A65 974 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 FERMT2Q96AC1 680 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-201ENST00000243253 N4BP1O75113 896 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 SLC35F6Q8N357 371 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 UBAC1Q9BSL1 405 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 RWDD2AQ9UIY3 292 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 CCDC196A0A1B0GTZ2 297 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 GPR101Q96P66 508 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 TTYH3Q9C0H2 523 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 KCNQ2O43526 872 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 VSNL1P62760 191 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 SKIDA1Q1XH10 827 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 WDR93Q6P2C0 686 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 ZNF662Q6ZS27 426 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
SEC61A1-201ENST00000243253 KRT2P35908 639 aa13.52□□□□□ -0.24
SEC61A1-201ENST00000243253 NOA1Q8NC60 698 aaKnown RBP13.52□□□□□ -0.24
SEC61A1-201ENST00000243253 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.24
SEC61A1-201ENST00000243253 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 FAM47AQ5JRC9 791 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 SRBD1Q8N5C6 995 aaKnown RBP13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 FEZ2Q9UHY8 353 aaPredicted RBP13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 LCMT1Q9UIC8 334 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 DNAJC7Q99615 494 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
SEC61A1-201ENST00000243253 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 NTSR2O95665 410 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 PTGDRQ13258 359 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 CEP112Q8N8E3 955 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 TTF2Q9UNY4 1162 aaKnown RBP13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 LRRIQ3A6PVS8 624 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 KLRC4O43908 158 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 CHP1Q99653 195 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 PSMD14O00487 310 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 ZNF569Q5MCW4 686 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 PDE11AQ9HCR9 933 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 CTNND2Q9UQB3 1225 aa13.51□□□□□ -0.25
SEC61A1-201ENST00000243253 NMT2O60551 498 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 IGHMBP2P38935 993 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 COPB1P53618 953 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 HERVK_113P62684 666 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 PRPF6O94906 941 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 SART3Q15020 963 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 MEA1Q16626 185 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 TRIM10Q9UDY6 481 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms