RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 GPKOWQ92917 476 aaPredicted RBP eCLIP21.49■■□□□ 1.03
SNX17-201ENST00000233575 LZTS2Q9BRK4 669 aa21.49■■□□□ 1.03
SNX17-201ENST00000233575 SPZ1Q9BXG8 430 aa21.49■■□□□ 1.03
SNX17-201ENST00000233575 GLIS2Q9BZE0 524 aaPredicted RBP21.49■■□□□ 1.03
SNX17-201ENST00000233575 FTOQ9C0B1 505 aaKnown RBP eCLIP21.49■■□□□ 1.03
SNX17-201ENST00000233575 VAT1LQ9HCJ6 419 aa21.49■■□□□ 1.03
SNX17-201ENST00000233575 SSC5DA1L4H1 1573 aa21.49■■□□□ 1.03
SNX17-201ENST00000233575 F5H6K3 240 aa21.48■■□□□ 1.03
SNX17-201ENST00000233575 KLRC3Q07444 240 aa21.48■■□□□ 1.03
SNX17-201ENST00000233575 RGS22Q8NE09 1264 aa21.48■■□□□ 1.03
SNX17-201ENST00000233575 ZC3H4Q9UPT8 1303 aaKnown RBP21.48■■□□□ 1.03
SNX17-201ENST00000233575 INPP5BP32019 993 aa21.48■■□□□ 1.03
SNX17-201ENST00000233575 HOMER1Q86YM7 354 aa21.48■■□□□ 1.03
SNX17-201ENST00000233575 NUP88Q99567 741 aaPredicted RBP21.48■■□□□ 1.03
SNX17-201ENST00000233575 PITPNM2Q9BZ72 1349 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 BTBD18B2RXH4 712 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 ADM5C9JUS6 153 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 NDUFB10O96000 172 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 EPHX2P34913 555 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 SLC16A2P36021 539 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 KIAA1755Q5JYT7 1200 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 GMCL1P1Q8NEA9 526 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 OXER1Q8TDS5 423 aa21.47■■□□□ 1.03
SNX17-201ENST00000233575 ISY1Q9ULR0 285 aaKnown RBP21.47■■□□□ 1.03
SNX17-201ENST00000233575 SLC1A4P43007 532 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 KRT85P78386 507 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 TYW1BQ6NUM6 668 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 DIS3L2Q8IYB7 885 aaKnown RBP21.46■■□□□ 1.03
SNX17-201ENST00000233575 SPICE1Q8N0Z3 855 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 PIGSQ96S52 555 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 PHF20Q9BVI0 1012 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 RIOX1Q9H6W3 641 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 POTECB2RU33 542 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 ADAMTS3O15072 1205 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 TRAK2O60296 914 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 GADD45BO75293 160 aaPredicted RBP21.46■■□□□ 1.03
SNX17-201ENST00000233575 ASNSP08243 561 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 CEBPZQ03701 1054 aaKnown RBP21.46■■□□□ 1.03
SNX17-201ENST00000233575 NR5A1Q13285 461 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 ARHGEF10LQ9HCE6 1279 aa21.46■■□□□ 1.03
SNX17-201ENST00000233575 U2AF2P26368 475 aaKnown RBP eCLIP21.45■■□□□ 1.024e-7■■■■■ 30.7
SNX17-201ENST00000233575 NPY5RQ15761 445 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 WWC2Q6AWC2 1192 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 DCAF4Q8WV16 495 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 USP28Q96RU2 1077 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 RBM27Q9P2N5 1060 aaKnown RBP21.45■■□□□ 1.02
SNX17-201ENST00000233575 TMX2Q9Y320 296 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 PPP2R3BQ9Y5P8 575 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.02
SNX17-201ENST00000233575 GPATCH4Q5T3I0 446 aaKnown RBP21.45■■□□□ 1.02
SNX17-201ENST00000233575 DCAF15Q66K64 600 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 TMEM87AQ8NBN3 555 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 DCPSQ96C86 337 aaKnown RBP21.45■■□□□ 1.02
SNX17-201ENST00000233575 ZNF341Q9BYN7 854 aa21.45■■□□□ 1.02
SNX17-201ENST00000233575 CTNND1O60716 968 aaKnown RBP21.44■■□□□ 1.02
SNX17-201ENST00000233575 XBP1P17861 261 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 GNL2Q13823 731 aaKnown RBP21.44■■□□□ 1.02
SNX17-201ENST00000233575 PRKG1Q13976 671 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 TPRNQ4KMQ1 711 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 MYSM1Q5VVJ2 828 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 HEATR3Q7Z4Q2 680 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 BRAPQ7Z569 592 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 ZKSCAN4Q969J2 545 aaPredicted RBP21.44■■□□□ 1.02
SNX17-201ENST00000233575 JMJD4Q9H9V9 463 aa21.44■■□□□ 1.02
SNX17-201ENST00000233575 USP50Q70EL3 339 aaPredicted RBP21.43■■□□□ 1.02
SNX17-201ENST00000233575 RRP36Q96EU6 259 aaKnown RBP21.43■■□□□ 1.02
SNX17-201ENST00000233575 GMCL1Q96IK5 515 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 WRNIP1Q96S55 665 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 TAF1DQ9H5J8 278 aaPredicted RBP21.43■■□□□ 1.02
SNX17-201ENST00000233575 SCN4AP35499 1836 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 DOCK1Q14185 1865 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 USP17L10C9JJH3 530 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 SAFBQ15424 915 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNX17-201ENST00000233575 SULF1Q8IWU6 871 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 GPT2Q8TD30 523 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 ZNF112Q9UJU3 913 aa21.43■■□□□ 1.02
SNX17-201ENST00000233575 STXBP3O00186 592 aa21.42■■□□□ 1.02
SNX17-201ENST00000233575 KRT26Q7Z3Y9 468 aa21.42■■□□□ 1.02
SNX17-201ENST00000233575 NOSTRINQ8IVI9 506 aa21.42■■□□□ 1.02
SNX17-201ENST00000233575 LEO1Q8WVC0 666 aaPredicted RBP21.42■■□□□ 1.02
SNX17-201ENST00000233575 EAPPQ56P03 285 aaPredicted RBP21.41■■□□□ 1.02
SNX17-201ENST00000233575 NOM1Q5C9Z4 860 aaKnown RBP21.41■■□□□ 1.02
SNX17-201ENST00000233575 FOXP1Q9H334 677 aaPredicted RBP21.41■■□□□ 1.02
SNX17-201ENST00000233575 BARHL2Q9NY43 387 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 SEC63Q9UGP8 760 aaKnown RBP21.41■■□□□ 1.02
SNX17-201ENST00000233575 SYNPO2Q9UMS6 1093 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 FAM205CA6NFA0 338 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 BMP3P12645 472 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 NLRP5P59047 1200 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 DGKZQ13574 1117 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
SNX17-201ENST00000233575 KLRG1Q96E93 195 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 HOOK2Q96ED9 719 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
SNX17-201ENST00000233575 DDX49Q9Y6V7 483 aaKnown RBP21.41■■□□□ 1.02
SNX17-201ENST00000233575 WDR90Q96KV7 1748 aa21.4■■□□□ 1.02
SNX17-201ENST00000233575 PPP1R11O60927 126 aaPredicted RBP21.4■■□□□ 1.02
SNX17-201ENST00000233575 KRT2P35908 639 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms