RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 OPTNQ96CV9 577 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 PRPF3O43395 683 aaKnown RBP12.32□□□□□ -0.44
CDCA3-201ENST00000229265 PPP6R2O75170 966 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
CDCA3-201ENST00000229265 RTN1Q16799 776 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
CDCA3-201ENST00000229265 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 SDR42E1Q8WUS8 393 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 ALG1Q9BT22 464 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 FOXP1Q9H334 677 aaPredicted RBP12.32□□□□□ -0.44
CDCA3-201ENST00000229265 GDPD2Q9HCC8 539 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDCA3-201ENST00000229265 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
CDCA3-201ENST00000229265 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 MAST2Q6P0Q8 1798 aa12.32□□□□□ -0.44
CDCA3-201ENST00000229265 SYCE3A1L190 88 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 SMIM22K7EJ46 135 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 CDC27P30260 824 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 KIF5BP33176 963 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 USP5P45974 858 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
CDCA3-201ENST00000229265 ZNF654Q8IZM8 581 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 ZNF444Q8N0Y2 327 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-201ENST00000229265 LINC00301Q8NCQ3 95 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 LZTS2Q9BRK4 669 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-201ENST00000229265 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
CDCA3-201ENST00000229265 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 ATAD5Q96QE3 1844 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 TESPA1A2RU30 521 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-201ENST00000229265 CCDC85CA6NKD9 419 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 GPR25O00155 361 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
CDCA3-201ENST00000229265 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-201ENST00000229265 MMP14P50281 582 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 TROAPQ12815 778 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 CRHR2Q13324 411 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 SLC39A14Q15043 492 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-201ENST00000229265 RILPL1Q5EBL4 403 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
CDCA3-201ENST00000229265 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 KRT40Q6A162 431 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-201ENST00000229265 NBPF11Q86T75 865 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 TIGD1Q96MW7 591 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 ARHGAP39Q9C0H5 1083 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 ZNF112Q9UJU3 913 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 CEP131Q9UPN4 1083 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 TNKSO95271 1327 aa12.3□□□□□ -0.44
CDCA3-201ENST00000229265 IRF6O14896 467 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 MYO1BO43795 1136 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
CDCA3-201ENST00000229265 CMA1P23946 247 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 BTDP43251 543 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 NOVP48745 357 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 ENAHQ8N8S7 591 aaPredicted RBP12.29□□□□□ -0.44
CDCA3-201ENST00000229265 SH3RF3Q8TEJ3 882 aaPredicted RBP12.29□□□□□ -0.44
CDCA3-201ENST00000229265 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 FUCA2Q9BTY2 467 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 NUP62CLQ9H1M0 184 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 LAMA4Q16363 1823 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
CDCA3-201ENST00000229265 DDX60LQ5H9U9 1706 aaKnown RBP12.28□□□□□ -0.44
CDCA3-201ENST00000229265 FAM237AA0A1B0GTK4 181 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 TSPY2A6NKD2 308 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 SPTLC2O15270 562 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 CA12O43570 354 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 BMP15O95972 392 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 MMP1P03956 469 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 NF2P35240 595 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 SOX10P56693 466 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 SF3A1Q15459 793 aaKnown RBP12.28□□□□□ -0.44
CDCA3-201ENST00000229265 SUPT20HL1Q3ZLR7 823 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 ANO1Q5XXA6 986 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 GALNT17Q6IS24 598 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 MICU3Q86XE3 530 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
CDCA3-201ENST00000229265 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms