RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CSPG5O95196 566 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 NPR1P16066 1061 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 LIG4P49917 911 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 ZBTB8OSQ8IWT0 167 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 ST7Q9NRC1 585 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 MED23Q9ULK4 1368 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 IRX5P78411 483 aaPredicted RBP20.49■□□□□ 0.87
CLIP2-201ENST00000223398 MXRA7P84157 204 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 HLFQ16534 295 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 CIAPIN1Q6FI81 312 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 TSGA10Q9BZW7 698 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 BTBD18B2RXH4 712 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 BMS1Q14692 1282 aaKnown RBP20.48■□□□□ 0.87
CLIP2-201ENST00000223398 TTLL3Q9Y4R7 772 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 GAS8O95995 478 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 IFRD2Q12894 506 aaPredicted RBP20.48■□□□□ 0.87
CLIP2-201ENST00000223398 SRRTQ9BXP5 876 aaKnown RBP20.48■□□□□ 0.87
CLIP2-201ENST00000223398 MYO1AQ9UBC5 1043 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 K7ENM7 598 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 GRAPQ13588 217 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 SEPT14Q6ZU15 432 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 ARMC9Q7Z3E5 817 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
CLIP2-201ENST00000223398 TRERF1Q96PN7 1200 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 TM6SF1Q9BZW5 370 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 NLRP12P59046 1061 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 NLRC4Q9NPP4 1024 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 FAM207AQ9NSI2 230 aaPredicted RBP20.48■□□□□ 0.87
CLIP2-201ENST00000223398 KDM3AQ9Y4C1 1321 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 ATP2A2P16615 1042 aaKnown RBP20.48■□□□□ 0.87
CLIP2-201ENST00000223398 LCORLQ8N3X6 602 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 APOL6Q9BWW8 343 aa20.48■□□□□ 0.87
CLIP2-201ENST00000223398 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 CYP27B1O15528 508 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 TNNC1P63316 161 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 PGBD1Q96JS3 809 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 LRRIQ4A6NIV6 560 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 EEPD1Q7L9B9 569 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 DYNLL2Q96FJ2 89 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 DDAH1O94760 285 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 OSBPP22059 807 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 TBC1D10BQ4KMP7 808 aaPredicted RBP20.47■□□□□ 0.87
CLIP2-201ENST00000223398 MMS19Q96T76 1030 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 NBPF3Q9H094 633 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 MTRF1LQ9UGC7 380 aaKnown RBP20.47■□□□□ 0.87
CLIP2-201ENST00000223398 USP17L8P0C7I0 530 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 CCDC14Q49A88 953 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 MED10Q9BTT4 135 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 ZMYND15Q9H091 742 aa20.47■□□□□ 0.87
CLIP2-201ENST00000223398 USP17L3A6NCW0 530 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 USP17L4A6NCW7 530 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 OR52Z1P0C646 297 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 POLGP54098 1239 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-201ENST00000223398 CCNA1P78396 465 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 USP17L1Q7RTZ2 530 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 AXIN2Q9Y2T1 843 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 ADCY9O60503 1353 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 CYP2D7A0A087X1C5 515 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 ERCC5P28715 1186 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-201ENST00000223398 RAB3IL1Q8TBN0 382 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 CCDC17Q96LX7 622 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 AMNQ9BXJ7 453 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 TTLL1O95922 423 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 CFAP58Q5T655 872 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 CACNB3P54284 484 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 SNX16P57768 344 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 SLC9C1Q4G0N8 1177 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 RASGRP4Q8TDF6 673 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 SWAP70Q9UH65 585 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 SERPINB13Q9UIV8 391 aa20.46■□□□□ 0.87
CLIP2-201ENST00000223398 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.87
CLIP2-201ENST00000223398 SLU7O95391 586 aaKnown RBP20.45■□□□□ 0.87
CLIP2-201ENST00000223398 DNAJC21Q5F1R6 531 aaKnown RBP20.45■□□□□ 0.87
CLIP2-201ENST00000223398 CYP26C1Q6V0L0 522 aa20.45■□□□□ 0.87
CLIP2-201ENST00000223398 SLFN12Q8IYM2 578 aa20.45■□□□□ 0.87
CLIP2-201ENST00000223398 MASTLQ96GX5 879 aa20.45■□□□□ 0.87
CLIP2-201ENST00000223398 CEP63Q96MT8 703 aa20.45■□□□□ 0.87
CLIP2-201ENST00000223398 FAM193BQ96PV7 902 aaPredicted RBP20.45■□□□□ 0.87
CLIP2-201ENST00000223398 KCNK9Q9NPC2 374 aa20.45■□□□□ 0.87
CLIP2-201ENST00000223398 PIM2Q9P1W9 311 aa20.45■□□□□ 0.87
CLIP2-201ENST00000223398 BCRP11274 1271 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 KLHL30Q0D2K2 578 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 ANKFY1Q9P2R3 1169 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 GABPAQ06546 454 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 CBX8Q9HC52 389 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 RPS6KA4O75676 772 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 JAKMIP2Q96AA8 810 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 PRIMPOLQ96LW4 560 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 PSMB7Q99436 277 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 PFKFB2O60825 505 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 ZMYM1Q5SVZ6 1142 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 ATRIPQ8WXE1 791 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 MAP3K4Q9Y6R4 1608 aa20.45■□□□□ 0.86
CLIP2-201ENST00000223398 ADPGKQ9BRR6 497 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 ZKSCAN5Q9Y2L8 839 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-201ENST00000223398 PFKFB1P16118 471 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 TRIM14Q14142 442 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 ZNF589Q86UQ0 364 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-201ENST00000223398 UBLCP1Q8WVY7 318 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms