RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 CCDC51Q96ER9 411 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 RIOK1Q9BRS2 568 aaKnown RBP20.9■□□□□ 0.94
CACTIN-201ENST00000221899 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
CACTIN-201ENST00000221899 ANAPC4Q9UJX5 808 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 GUCA1BQ9UMX6 200 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 TFR2Q9UP52 801 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 CTAGE15A4D2H0 777 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 CTAGE8P0CG41 777 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 UBXN1Q04323 297 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 ZSCAN26Q16670 478 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 TCP11X2Q5H9J9 407 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 CYP26C1Q6V0L0 522 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 TMTC3Q6ZXV5 915 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 CTAGE6Q86UF2 777 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 CTAGE4Q8IX94 777 aa20.9■□□□□ 0.94
CACTIN-201ENST00000221899 NOA1Q8NC60 698 aaKnown RBP20.9■□□□□ 0.94
CACTIN-201ENST00000221899 TRIM49BA6NDI0 452 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 SLC4A8Q2Y0W8 1093 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 FAM47AQ5JRC9 791 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 AK7Q96M32 723 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 RBM28Q9NW13 759 aaKnown RBP20.89■□□□□ 0.93
CACTIN-201ENST00000221899 RWDD2AQ9UIY3 292 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 RAB21Q9UL25 225 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 BAZ2AQ9UIF9 1905 aaKnown RBP20.89■□□□□ 0.93
CACTIN-201ENST00000221899 CNTNAP5Q8WYK1 1306 aa20.89■□□□□ 0.93
CACTIN-201ENST00000221899 ERLIN1O75477 346 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 HNRNPLLQ8WVV9 542 aaKnown RBP20.88■□□□□ 0.93
CACTIN-201ENST00000221899 ZFP91Q96JP5 570 aaPredicted RBP20.88■□□□□ 0.93
CACTIN-201ENST00000221899 SLAIN2Q9P270 581 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 USP17L12C9JPN9 530 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 USP17L21D6R901 530 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 POTEB2H3BUK9 544 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 TULP2O00295 520 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 PRCPP42785 496 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 L1RE1Q9UN81 338 aa20.88■□□□□ 0.93
CACTIN-201ENST00000221899 ENC1O14682 589 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 GTPBP6O43824 516 aaPredicted RBP20.87■□□□□ 0.93
CACTIN-201ENST00000221899 PHACTR2O75167 634 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 FECHP22830 423 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 USP5P45974 858 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 ANKRD20A12PQ8NF67 263 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 PLCH1Q4KWH8 1693 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 RPN1P04843 607 aaKnown RBP20.87■□□□□ 0.93
CACTIN-201ENST00000221899 CTR9Q6PD62 1173 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
CACTIN-201ENST00000221899 EXOC4Q96A65 974 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 HDAC6Q9UBN7 1215 aa20.87■□□□□ 0.93
CACTIN-201ENST00000221899 CICQ96RK0 1608 aaPredicted RBP20.87■□□□□ 0.93
CACTIN-201ENST00000221899 PLIN2Q99541 437 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 MYO6Q9UM54 1294 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 NIP7Q9Y221 180 aaKnown RBP eCLIP20.86■□□□□ 0.93
CACTIN-201ENST00000221899 FAN1Q9Y2M0 1017 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 REXO2Q9Y3B8 237 aaKnown RBP20.86■□□□□ 0.93
CACTIN-201ENST00000221899 BCL9LQ86UU0 1499 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 DUOX1Q9NRD9 1551 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 COL4A1P02462 1669 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 LRRC10BA6NIK2 292 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 ZNF658Q5TYW1 1059 aaPredicted RBP20.86■□□□□ 0.93
CACTIN-201ENST00000221899 RASGRP4Q8TDF6 673 aa20.86■□□□□ 0.93
CACTIN-201ENST00000221899 COL1A1P02452 1464 aaPredicted RBP20.86■□□□□ 0.93
CACTIN-201ENST00000221899 EIF5P55010 431 aaKnown RBP20.85■□□□□ 0.93
CACTIN-201ENST00000221899 WHAMMP3Q1A5X7 153 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 ZNF384Q8TF68 577 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 CCDC102AQ96A19 550 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 EEF2KMTQ96G04 330 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 TTC26A0AVF1 554 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 CALM1P0DP23 149 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 CALM2P0DP24 149 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 CALM3P0DP25 149 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 SCG2P13521 617 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 PMS1P54277 932 aaKnown RBP20.85■□□□□ 0.93
CACTIN-201ENST00000221899 SPAG1Q07617 926 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 NHSL1Q5SYE7 1610 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 PP2D1A8MPX8 630 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 NDUFA10O95299 355 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 CASP8Q14790 479 aa20.85■□□□□ 0.93
CACTIN-201ENST00000221899 BBXQ8WY36 941 aaPredicted RBP20.85■□□□□ 0.93
CACTIN-201ENST00000221899 GPKOWQ92917 476 aaPredicted RBP eCLIP20.85■□□□□ 0.93
CACTIN-201ENST00000221899 EPN1Q9Y6I3 576 aaPredicted RBP20.85■□□□□ 0.93
CACTIN-201ENST00000221899 DDAH1O94760 285 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 PARP1P09874 1014 aaKnown RBP20.84■□□□□ 0.93
CACTIN-201ENST00000221899 STAT6P42226 847 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 AMPD2Q01433 879 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
CACTIN-201ENST00000221899 TUBB2AQ13885 445 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 MUM1L1Q5H9M0 696 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 RASSF8Q8NHQ8 419 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 TUBB2BQ9BVA1 445 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 SRGAP2O75044 1071 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 EIF3JO75822 258 aaKnown RBP20.84■□□□□ 0.93
CACTIN-201ENST00000221899 CYP2D6P10635 497 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 INTS5Q6P9B9 1019 aaKnown RBP20.84■□□□□ 0.93
CACTIN-201ENST00000221899 IRF2BP1Q8IU81 584 aa20.84■□□□□ 0.93
CACTIN-201ENST00000221899 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
CACTIN-201ENST00000221899 GNL3LQ9NVN8 582 aaKnown RBP20.83■□□□□ 0.93
CACTIN-201ENST00000221899 FAM205AQ6ZU69 1335 aa20.83■□□□□ 0.92
CACTIN-201ENST00000221899 NTSR2O95665 410 aa20.83■□□□□ 0.92
CACTIN-201ENST00000221899 TRIM14Q14142 442 aa20.83■□□□□ 0.92
CACTIN-201ENST00000221899 BRIP1Q9BX63 1249 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms