RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 TAF1CQ15572 869 aaPredicted RBP5.21□□□□□ -1.58
CDKN3-201ENST00000216414 EAPPQ56P03 285 aaPredicted RBP5.21□□□□□ -1.58
CDKN3-201ENST00000216414 CEP128Q6ZU80 1094 aa5.21□□□□□ -1.58
CDKN3-201ENST00000216414 NLRX1Q86UT6 975 aa5.21□□□□□ -1.58
CDKN3-201ENST00000216414 CCDC84Q86UT8 332 aaPredicted RBP5.21□□□□□ -1.58
CDKN3-201ENST00000216414 GATAD2BQ8WXI9 593 aa5.21□□□□□ -1.58
CDKN3-201ENST00000216414 SIGLEC10Q96LC7 697 aa5.21□□□□□ -1.58
CDKN3-201ENST00000216414 KIF2CQ99661 725 aa5.21□□□□□ -1.58
CDKN3-201ENST00000216414 G6PC3Q9BUM1 346 aa5.21□□□□□ -1.58
CDKN3-201ENST00000216414 FAM221AA4D161 298 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 NOTOA8MTQ0 251 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 EFEMP2O95967 443 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 PF4P02776 101 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 EPHB3P54753 998 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 LMNB2Q03252 620 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 NMIQ13287 307 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-201ENST00000216414 CAMK2GQ13555 558 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-201ENST00000216414 SKOR2Q2VWA4 1001 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-201ENST00000216414 RNF111Q6ZNA4 994 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 FOXP3Q9BZS1 431 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 PARP2Q9UGN5 583 aa5.2□□□□□ -1.58
CDKN3-201ENST00000216414 OTOL1A6NHN0 477 aaPredicted RBP5.19□□□□□ -1.58
CDKN3-201ENST00000216414 NRDCO43847 1150 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 FKTNO75072 461 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 HTR3BO95264 441 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 SDHBP21912 280 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 ST13P50502 369 aaKnown RBP5.19□□□□□ -1.58
CDKN3-201ENST00000216414 PSMD2Q13200 908 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 VMACQ2NL98 169 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 ZXDCQ2QGD7 858 aaPredicted RBP5.19□□□□□ -1.58
CDKN3-201ENST00000216414 USHBP1Q8N6Y0 703 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 MAP6Q96JE9 813 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 HDAC8Q9BY41 377 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 XYLT2Q9H1B5 865 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 TCFL5Q9UL49 500 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 ZNF281Q9Y2X9 895 aa5.19□□□□□ -1.58
CDKN3-201ENST00000216414 POLR3KQ9Y2Y1 108 aaPredicted RBP5.19□□□□□ -1.58
CDKN3-201ENST00000216414 N4BP3O15049 544 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 DNAJA2O60884 412 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 VIPR1P32241 457 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 GBP2P32456 591 aaPredicted RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 KIR2DL1P43626 348 aaPredicted RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 KIR2DL2P43627 348 aaPredicted RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 PCBP3P57721 371 aaKnown RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 NFKB2Q00653 900 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 FEZF2Q8TBJ5 459 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 ENOX1Q8TC92 643 aaKnown RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 SYTL5Q8TDW5 730 aaPredicted RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 DACT3Q96B18 629 aaPredicted RBP5.18□□□□□ -1.58
CDKN3-201ENST00000216414 TCTN2Q96GX1 697 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 CNTD2Q9H8S5 307 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 CRTAC1Q9NQ79 661 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 PRR36Q9H6K5 1346 aa5.18□□□□□ -1.58
CDKN3-201ENST00000216414 ANKRD33BA6NCL7 494 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 SLC22A31A6NKX4 558 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 HRKO00198 91 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 RAG1P15918 1043 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 RNF4P78317 190 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 FAM160A1Q05DH4 1040 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 SNAP47Q5SQN1 464 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 OLFML2BQ68BL8 750 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 ZPBP2Q6X784 338 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 TMC3Q7Z5M5 1100 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 RELL1Q8IUW5 271 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 ZDHHC14Q8IZN3 488 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 DAGLBQ8NCG7 672 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 VWCEQ96DN2 955 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 HHIPL1Q96JK4 782 aa5.17□□□□□ -1.58
CDKN3-201ENST00000216414 USP31Q70CQ4 1352 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 SYPP08247 313 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 CTSHP09668 335 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 PNLIPP16233 465 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 RTP1P59025 263 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 DAB2P98082 770 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 XPCQ01831 940 aaPredicted RBP5.16□□□□□ -1.58
CDKN3-201ENST00000216414 MLECQ14165 292 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 CNKSR3Q6P9H4 555 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 ZNF655Q8N720 491 aaPredicted RBP5.16□□□□□ -1.58
CDKN3-201ENST00000216414 RHOVQ96L33 236 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 FAM161BQ96MY7 647 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 PLCD4Q9BRC7 762 aa5.16□□□□□ -1.58
CDKN3-201ENST00000216414 TMEM82A0PJX8 343 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 MINDY4BA8MYZ0 360 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 RGS13O14921 159 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 CDR1P51861 262 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 KRTAP10-2P60368 255 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 SNW1Q13573 536 aaKnown RBP5.15□□□□□ -1.59
CDKN3-201ENST00000216414 MPP2Q14168 576 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 ARSHQ5FYA8 562 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 REC114Q7Z4M0 266 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 SP8Q8IXZ3 490 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 GOLM1Q8NBJ4 401 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 SYT8Q8NBV8 401 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 FBXO27Q8NI29 283 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 TMEM74Q96NL1 305 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 EPB41L4AQ9HCS5 686 aaPredicted RBP5.15□□□□□ -1.59
CDKN3-201ENST00000216414 TAF6LQ9Y6J9 622 aa5.15□□□□□ -1.59
CDKN3-201ENST00000216414 ABLIM1O14639 778 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 TLR3O15455 904 aaKnown RBP5.14□□□□□ -1.59
CDKN3-201ENST00000216414 UBOX5O94941 541 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms