RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 MAGEA9P43362 315 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 ERVK-24P63145 666 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 ASIC1P78348 528 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 KRT83P78385 493 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 SMCR8Q8TEV9 937 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-201ENST00000193403 FAM207AQ9NSI2 230 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-201ENST00000193403 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
ACTN1-201ENST00000193403 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 CSGALNACT2Q8N6G5 542 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 OTUD6BQ8N6M0 293 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 SMARCAL1Q9NZC9 954 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 ADD3Q9UEY8 706 aaKnown RBP12.54□□□□□ -0.4
ACTN1-201ENST00000193403 STX8Q9UNK0 236 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.54□□□□□ -0.4
ACTN1-201ENST00000193403 UBR1Q8IWV7 1749 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 PLEKHA8P1O95397 391 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 TCIRG1Q13488 830 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 EHD4Q9H223 541 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 CAPN7Q9Y6W3 813 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 TTC26A0AVF1 554 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 TACC1O75410 805 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 BCAMP50895 628 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 FAM47AQ5JRC9 791 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 CRACR2BQ8N4Y2 399 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 GOLGA6L10A6NI86 522 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 ZNF18P17022 549 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 EHBP1Q8NDI1 1231 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 CDK5RAP3Q96JB5 506 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 SELENOOQ9BVL4 669 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 CAPS2Q9BXY5 557 aa12.53□□□□□ -0.4
ACTN1-201ENST00000193403 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
ACTN1-201ENST00000193403 TSPY2A6NKD2 308 aa12.52□□□□□ -0.4
ACTN1-201ENST00000193403 PARP1P09874 1014 aaKnown RBP12.52□□□□□ -0.4
ACTN1-201ENST00000193403 CDR1P51861 262 aa12.52□□□□□ -0.4
ACTN1-201ENST00000193403 PACS2Q86VP3 889 aa12.52□□□□□ -0.4
ACTN1-201ENST00000193403 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.4
ACTN1-201ENST00000193403 EFCC1Q9HA90 598 aa12.52□□□□□ -0.4
ACTN1-201ENST00000193403 CPDO75976 1380 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 BUB1O43683 1085 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 CIAO1O76071 339 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 IKQ13123 557 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-201ENST00000193403 PDCLQ13371 301 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 GPKOWQ92917 476 aaPredicted RBP eCLIP12.52□□□□□ -0.41
ACTN1-201ENST00000193403 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 RMND1Q9NWS8 449 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 USP8P40818 1118 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 EPS15P42566 896 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 RASGRP2Q7LDG7 609 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 KRT26Q7Z3Y9 468 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 CEP57Q86XR8 500 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 TMTC2Q8N394 836 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 CCDC51Q96ER9 411 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 ALS2CR12Q96Q35 445 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 GSDMAQ96QA5 445 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 EXOC1Q9NV70 894 aa12.52□□□□□ -0.41
ACTN1-201ENST00000193403 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-201ENST00000193403 A0A087X0B3 334 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 LOC102724159A0A0B4J2E5 919 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 TUBBP07437 444 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 TUBB2AQ13885 445 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 PWP2Q15269 919 aaKnown RBP12.51□□□□□ -0.41
ACTN1-201ENST00000193403 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 TUBB2BQ9BVA1 445 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 C1orf167Q5SNV9 1468 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 JCADQ9P266 1359 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 RPN1P04843 607 aaKnown RBP12.51□□□□□ -0.41
ACTN1-201ENST00000193403 C8orf74Q6P047 294 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 AMOTL1Q8IY63 956 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 DIP2AQ14689 1571 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 MAP2K7O14733 419 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 FOXP2O15409 715 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 TCP11X2Q5H9J9 407 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 GIMAP7Q8NHV1 300 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 LRWD1Q9UFC0 647 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 DUSP10Q9Y6W6 482 aa12.51□□□□□ -0.41
ACTN1-201ENST00000193403 ESYT3A0FGR9 886 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 PDE4DQ08499 809 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 UBE3CQ15386 1083 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms