RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ift122Q6NWV3 1182 aa20.71■□□□□ 0.91
Trim47-202ENSMUST00000106441 EcsitQ9QZH6 435 aa20.71■□□□□ 0.91
Trim47-202ENSMUST00000106441 Stk39Q9Z1W9 556 aa20.71■□□□□ 0.91
Trim47-202ENSMUST00000106441 Adssl1P28650 457 aa20.7■□□□□ 0.91
Trim47-202ENSMUST00000106441 Tom1l2Q5SRX1 507 aa20.7■□□□□ 0.91
Trim47-202ENSMUST00000106441 Ctdspl2Q8BG15 465 aa20.7■□□□□ 0.91
Trim47-202ENSMUST00000106441 Pnpla6Q3TRM4 1355 aa20.7■□□□□ 0.91
Trim47-202ENSMUST00000106441 Zscan20B2KFW1 1030 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Arid4aF8VPQ2 1261 aaKnown RBP20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Akap2O54931 893 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Grin1P35438 938 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Gng11P61953 73 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Spata18Q0P557 537 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Kiaa1468Q148V7 1216 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Hspa4Q61316 841 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ankrd13aQ80UP5 588 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Hps4Q99KG7 671 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Mrps25Q9D125 171 aaKnown RBP20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Klhl40Q9D783 621 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Lmbr1Q9JIT0 490 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Hic2Q9JLZ6 619 aaKnown RBP20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Jag1Q9QXX0 1218 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 NynrinQ5DTZ0 1840 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 Aox3G3X982 1335 aa20.7■□□□□ 0.9
Trim47-202ENSMUST00000106441 AW822073A0A0N4SUK1 652 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 NogP97466 232 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 CrkQ64010 304 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 NesQ6P5H2 1864 aaKnown RBP20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 Mical3Q8CJ19 1993 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 NefhP19246 1090 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 CebpaP53566 359 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ica1lQ3TY65 431 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 Map3k12Q60700 888 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 Iqcb1Q8BP00 598 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ptrh1Q8BW00 204 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 CerkQ8K4Q7 531 aa20.69■□□□□ 0.9
Trim47-202ENSMUST00000106441 AfdnQ9QZQ1 1820 aaKnown RBP20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Dennd3A2RT67 1274 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Lrch1P62046 709 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Q3TYL0 343 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Slc27a1Q60714 646 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ift88Q61371 824 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Pex1Q5BL07 1284 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ncoa7Q6DFV7 943 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Adck5Q80V03 582 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Csrnp2Q8BGQ2 534 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 SpidrQ8BGX7 933 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Terb1Q8C0V1 768 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Q8CEZ4 452 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Iqca1Q9CUL5 857 aa20.68■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ces1hD3Z298 562 aa20.67■□□□□ 0.9
Trim47-202ENSMUST00000106441 PparaP23204 468 aa20.67■□□□□ 0.9
Trim47-202ENSMUST00000106441 Ppp4cP97470 307 aa20.67■□□□□ 0.9
Trim47-202ENSMUST00000106441 Cep128Q8BI22 1102 aa20.67■□□□□ 0.9
Trim47-202ENSMUST00000106441 Hdac9Q99N13 588 aa20.67■□□□□ 0.9
Trim47-202ENSMUST00000106441 Cep89Q9CZX2 791 aa20.67■□□□□ 0.9
Trim47-202ENSMUST00000106441 Gm10134F6ZQC6 126 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Grem2O88273 168 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Mcm6P97311 821 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Slc10a5Q5PT54 434 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Tm4sf1Q64302 202 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Slc20a2Q80UP8 656 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Golga5Q9QYE6 729 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Samd1D3YXK1 519 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Actn3O88990 900 aaKnown RBP20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Rtel1Q0VGM9 1203 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Nab2Q61127 525 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Trim25Q61510 634 aaKnown RBP20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Stn1Q8K2X3 378 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Cfap45Q9D9U9 551 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Eif4enif1Q9EST3 983 aaKnown RBP20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Stk32bQ9JJX8 414 aa20.66■□□□□ 0.9
Trim47-202ENSMUST00000106441 Lcmt1A0A0U1RNF2 332 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 GabreA2AMW3 916 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Cyp3a25O09158 503 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Pde11aP0C1Q2 933 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Kcna3P16390 528 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Pola2P33611 600 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Npr3P70180 536 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Lrriq3Q14DL3 633 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Rnf180Q3U827 592 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Rbm12b2Q66JV4 834 aaKnown RBP20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Lrrd1Q8C0R9 853 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Tbc1d23Q8K0F1 684 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Brms1Q99N20 246 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 MicalclQ9D5U9 680 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Rsrc2A2RTL5 376 aaKnown RBP20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Rps12P63323 132 aaKnown RBP20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 GmpsQ3THK7 693 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Fam170aQ66LM6 333 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Kif1bpQ6ZPU9 617 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 Etnk1Q9D4V0 363 aa20.65■□□□□ 0.9
Trim47-202ENSMUST00000106441 D1Pas1P16381 660 aa20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Fam89aQ14BJ1 175 aa20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tmed8Q3UHI4 326 aa20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Sval3Q76I99 144 aa20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tmco3Q8BH01 678 aa20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Vps16Q920Q4 839 aa20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Rai14Q9EP71 979 aaKnown RBP20.64■□□□□ 0.89
Trim47-202ENSMUST00000106441 Sec23aQ01405 765 aa20.63■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms