RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 SynrgQ5SV85 1306 aa17.54■□□□□ 0.4
Trim3-201ENSMUST00000057525 Tmem132bF7BAB2 1078 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Gm28047Q3US59 414 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Armc6Q8BNU0 468 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Col4a3bpQ9EQG9 624 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 ImpactO55091 318 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 ThbdP15306 577 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 C87499Q3UX49 493 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Plcd3Q8K2J0 785 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Arpp21Q9DCB4 807 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 SmapQ9R0P4 181 aaKnown RBP17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Ccdc112A0AUP1 442 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Grin1P35438 938 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Ccdc84Q4VA36 332 aaKnown RBP17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Srek1Q8BZX4 494 aaKnown RBP17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Riox2Q8CD15 465 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Nod2Q8K3Z0 1020 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Gpsm2Q8VDU0 679 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 NenfQ9CQ45 171 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 4921524L21RikQ9D5T2 438 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Inpp4aQ9EPW0 939 aa17.53■□□□□ 0.4
Trim3-201ENSMUST00000057525 Ep400Q8CHI8 3072 aaKnown RBP17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 L1camP11627 1260 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Sptlc2P97363 560 aaKnown RBP17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Gdf10P97737 476 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Vmn1r209Q5NC97 312 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Znf653Q6YND2 615 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 C8aQ8K182 587 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Defb15Q8R2I5 79 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Hnrnpul1Q8VDM6 859 aaKnown RBP17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Gm5114W4VSN8 858 aa17.52■□□□□ 0.4
Trim3-201ENSMUST00000057525 Dnaaf5B9EJR8 853 aa17.52■□□□□ 0.39
Trim3-201ENSMUST00000057525 Sfi1Q3UZY0 1216 aaKnown RBP17.52■□□□□ 0.39
Trim3-201ENSMUST00000057525 Arhgef6Q8K4I3 771 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Dppa3Q8QZY3 150 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Pdlim2Q8R1G6 349 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Lzts2Q91YU6 671 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Megf6Q80V70 1572 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Kansl3A2RSY1 903 aaKnown RBP17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 1700113H08RikE9Q9Q5 327 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Rhpn1Q61085 643 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Swap70Q6A028 585 aaKnown RBP17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Cnksr2Q80YA9 1032 aa17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Igf2bp3Q9CPN8 579 aaKnown RBP17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Acot9Q9R0X4 439 aaKnown RBP17.51■□□□□ 0.39
Trim3-201ENSMUST00000057525 Ankrd35E9Q9D8 996 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Il13ra2O88786 383 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Ttll12Q3UDE2 639 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 4933416C03RikQ3V063 378 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Zscan22Q8BGS5 496 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Scfd2Q8BTY8 684 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tmem60Q8K174 133 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Oxnad1Q8VE38 311 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 A0A0U1RNP2 1173 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 MarcksP26645 309 aaKnown RBP17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Slc9a1Q61165 820 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Dlg1Q811D0 905 aaKnown RBP17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tmem191cQ9JJB1 302 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 OatP29758 439 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tfcp2l1Q3UNW5 479 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Polr3gQ6NXY9 223 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Epc2Q8C0I4 808 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Cdan1Q8CC12 1239 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Nr2e3Q9QXZ7 395 aa17.5■□□□□ 0.39
Trim3-201ENSMUST00000057525 Nat10Q8K224 1024 aaKnown RBP17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Kiaa1024Q8K3V7 917 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Bst2Q8R2Q8 172 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tspyl4Q8VD63 406 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Vps16Q920Q4 839 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Myo1hQ9D6A1 958 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Styxl1Q9DAR2 321 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Gm43738A0A0G2JEA5 862 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Cyp7b1Q60991 507 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Dync1li2Q6PDL0 492 aaKnown RBP17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Kiaa1524Q8BWY9 907 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 MslnlQ8C160 685 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Spon1Q8VCC9 807 aa17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Hic2Q9JLZ6 619 aaKnown RBP17.49■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tll1Q62381 1013 aa17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Sgip1Q8VD37 806 aa17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Kif4P33174 1231 aa17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tmem130Q6NXM3 419 aa17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Yars2Q8BYL4 472 aaKnown RBP17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Cacna1fQ9JIS7 1985 aa17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Ktn1Q61595 1327 aaKnown RBP17.48■□□□□ 0.39
Trim3-201ENSMUST00000057525 Gm7356A0A087WSA6 508 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Oog1E9Q5G7 496 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Mmp10O55123 476 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Atp13a3Q5XF89 1219 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Casc1Q6TDU8 730 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 SltmQ8CH25 1031 aaKnown RBP17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Q8K2W9 541 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Krtap5-3Q9D226 196 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Ccdc88cQ6VGS5 2009 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 PRAG1Q571I4 1179 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Ptger2Q62053 362 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Morc2bQ8C5W4 1022 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Palm3A2TJV2 734 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Jakmip3Q5DTN8 844 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Prl2c1Q5SVL9 228 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms