RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 C7orf61Q8IZ16 206 aa14.1□□□□□ -0.15
ERGIC3-220ENST00000640748 CRACR2BQ8N4Y2 399 aaPredicted RBP14.1□□□□□ -0.15
ERGIC3-220ENST00000640748 GINM1Q9NU53 330 aa14.1□□□□□ -0.15
ERGIC3-220ENST00000640748 PFASO15067 1338 aa14.1□□□□□ -0.15
ERGIC3-220ENST00000640748 RNF113AO15541 343 aaKnown RBP14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 GH2P01242 217 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 CYP7A1P22680 504 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 ERVK-9P63128 1117 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 ERVK-24P63145 666 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 CCL14Q16627 93 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 MORN1Q5T089 497 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 TATDN1Q6P1N9 297 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 MIGA1Q8NAN2 632 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 SOCS4Q8WXH5 440 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 MAP4K1Q92918 833 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 NUDT12Q9BQG2 462 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 NBPF3Q9H094 633 aa14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 ZMYND8Q9ULU4 1186 aaPredicted RBP14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 DDX60LQ5H9U9 1706 aaKnown RBP14.09□□□□□ -0.15
ERGIC3-220ENST00000640748 CNMDO75829 334 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 CD2BP2O95400 341 aaKnown RBP14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 MAPK4P31152 587 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 BMP8BP34820 402 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 MCM2P49736 904 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 CACNB2Q08289 660 aaPredicted RBP14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 ZMYM1Q5SVZ6 1142 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 LHX8Q68G74 356 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 ZSCAN25Q6NSZ9 544 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 GPR142Q7Z601 462 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 KCNB2Q92953 911 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 C12orf42Q96LP6 360 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.08□□□□□ -0.162e-6■■■□□ 14.9
ERGIC3-220ENST00000640748 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 ANTXR1Q9H6X2 564 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 RBM8AQ9Y5S9 174 aaKnown RBP14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 SNX14Q9Y5W7 946 aa14.08□□□□□ -0.16
ERGIC3-220ENST00000640748 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 HLA-DOAP06340 250 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 COL6A1P12109 1028 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 NEK4P51957 841 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 ZNF589Q86UQ0 364 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 MAGEB6Q8N7X4 407 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 TRIM34Q9BYJ4 488 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 EHD4Q9H223 541 aa14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 SLKQ9H2G2 1235 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-220ENST00000640748 A0A0C4DFX4 3053 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 ZKSCAN1P17029 563 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 SYN1P17600 705 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 CCND3P30281 292 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 ZYXQ15942 572 aaKnown RBP14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 PAGR1Q9BTK6 254 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 SERPINB13Q9UIV8 391 aa14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-220ENST00000640748 HSP90AA1P07900 732 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 GUCY1A2P33402 732 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 SHMT1P34896 483 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 RGS2P41220 211 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 MAGEA10P43363 369 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 EVX2Q03828 476 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 CREB3L3Q68CJ9 461 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 CCDC129Q6ZRS4 1044 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 GTF3C2Q8WUA4 911 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 SEC62Q99442 399 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 APBA2Q99767 749 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 RIOK1Q9BRS2 568 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 TM6SF1Q9BZW5 370 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 KIAA1683Q9H0B3 1180 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 FLRT1Q9NZU1 646 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 RABGAP1Q9Y3P9 1069 aa14.05□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 SLC27A2O14975 620 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 IGHA2P01877 340 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 VCAM1P19320 739 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP5P45974 858 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 PLCD1P51178 756 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 RASEFQ8IZ41 740 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 APPBP2Q92624 585 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 BTBD7Q9P203 1132 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 DNAH12Q6ZR08 3092 aa14.04□□□□□ -0.16
ERGIC3-220ENST00000640748 MYH1P12882 1939 aa14.03□□□□□ -0.16
ERGIC3-220ENST00000640748 CHGBP05060 677 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms