RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ZSCAN20P17040 1043 aaPredicted RBP9□□□□□ -0.97
NECAP1-220ENST00000639841 TFE3P19532 575 aaPredicted RBP9□□□□□ -0.97
NECAP1-220ENST00000639841 PICALMQ13492 652 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 TEAD4Q15561 434 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 CCDC93Q567U6 631 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 ENAHQ8N8S7 591 aaPredicted RBP9□□□□□ -0.97
NECAP1-220ENST00000639841 CRBNQ96SW2 442 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 LRRC3Q9BY71 257 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 NCOA5Q9HCD5 579 aaKnown RBP9□□□□□ -0.97
NECAP1-220ENST00000639841 GTF2A1LQ9UNN4 478 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 CPDO75976 1380 aa9□□□□□ -0.97
NECAP1-220ENST00000639841 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 PARP4Q9UKK3 1724 aaKnown RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 CELA3AP09093 270 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 BCAMP50895 628 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 TRIP4Q15650 581 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 LONRF1Q17RB8 773 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 FOXB2Q5VYV0 432 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 SUGP1Q8IWZ8 645 aaKnown RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 WDR66Q8TBY9 1149 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 ATXN2LQ8WWM7 1075 aaKnown RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 SPSB2Q99619 263 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 ZNRF3Q9ULT6 936 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 KIAA1210Q9ULL0 1709 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 TNKSO95271 1327 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 UPK3BL1B0FP48 263 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 UPK3BL2E5RIL1 263 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 RIMBP2O15034 1052 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 NBNO60934 754 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 GEMIN4P57678 1058 aaKnown RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 SV2BQ7L1I2 683 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 LRRTM3Q86VH5 581 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 USP33Q8TEY7 942 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 SPATA9Q9BWV2 254 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 C9orf78Q9NZ63 289 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-220ENST00000639841 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
NECAP1-220ENST00000639841 TOPAZ1Q8N9V7 1692 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 DNAJC25-GNG10A0A024R161 153 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 APAF1O14727 1248 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 EREGO14944 169 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 GPR39O43194 453 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 SDSP20132 328 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 CASP2P42575 452 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 STRN3Q13033 797 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 ZNF438Q7Z4V0 828 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 TPH2Q8IWU9 490 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 CCDC89Q8N998 374 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 ZBTB38Q8NAP3 1195 aaPredicted RBP8.98□□□□□ -0.97
NECAP1-220ENST00000639841 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 TRHDEQ9UKU6 1024 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 ZNF232Q9UNY5 417 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 USP20Q9Y2K6 914 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 PCDHB3Q9Y5E6 796 aa8.98□□□□□ -0.97
NECAP1-220ENST00000639841 TCERG1O14776 1098 aaKnown RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 F13A1P00488 732 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 GNRH1P01148 92 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 FCGRTP55899 365 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 R3HDM1Q15032 1099 aaKnown RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 LONRF2Q1L5Z9 754 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 CNNM4Q6P4Q7 775 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 L3MBTL2Q969R5 705 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 KIF2CQ99661 725 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 SPON1Q9HCB6 807 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 FAM13BQ9NYF5 915 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 PPM1HQ9ULR3 514 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 ARHGEF28Q8N1W1 1705 aaKnown RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 SSH2Q76I76 1423 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 IL2RAP01589 272 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 MCM4P33991 863 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 PPM1FP49593 454 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 GPSM2P81274 684 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 ZKSCAN2Q63HK3 967 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 BNC2Q6ZN30 1099 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 RUFY4Q6ZNE9 571 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 TOGARAM2Q6ZUX3 1019 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 DDX46Q7L014 1031 aaKnown RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 GET4Q7L5D6 327 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 KISS1RQ969F8 398 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 ERP27Q96DN0 273 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 ELAC2Q9BQ52 826 aaKnown RBP8.97□□□□□ -0.97
NECAP1-220ENST00000639841 HERPUD2Q9BSE4 406 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 RUSC1Q9BVN2 902 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 CLIC5Q9NZA1 410 aa8.97□□□□□ -0.97
NECAP1-220ENST00000639841 NRKQ7Z2Y5 1582 aa8.96□□□□□ -0.97
NECAP1-220ENST00000639841 RRM1P23921 792 aa8.96□□□□□ -0.98
NECAP1-220ENST00000639841 L1CAMP32004 1257 aa8.96□□□□□ -0.98
NECAP1-220ENST00000639841 GALEQ14376 348 aa8.96□□□□□ -0.98
NECAP1-220ENST00000639841 CXorf57Q6NSI4 855 aaKnown RBP8.96□□□□□ -0.98
NECAP1-220ENST00000639841 RBBP8NLQ8NC74 664 aaPredicted RBP8.96□□□□□ -0.98
NECAP1-220ENST00000639841 EXOC2Q96KP1 924 aa8.96□□□□□ -0.98
NECAP1-220ENST00000639841 SELENOOQ9BVL4 669 aa8.96□□□□□ -0.98
NECAP1-220ENST00000639841 RSPH9Q9H1X1 276 aaPredicted RBP8.96□□□□□ -0.98
NECAP1-220ENST00000639841 GTF2IRD1Q9UHL9 959 aa8.96□□□□□ -0.98
NECAP1-220ENST00000639841 OVOS2A0A0G2JMS6 1433 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms