RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 UBXN2AP68543 259 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 KANSL2Q9H9L4 492 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 ZSWIM5Q9P217 1185 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 PI4KBQ9UBF8 816 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 AGLP35573 1532 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 SCRN1Q12765 414 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 MYCT1Q8N699 235 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 CCDC113Q9H0I3 377 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 MLXIPQ9HAP2 919 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 ZMYM6O95789 1325 aa15.27■□□□□ 0.03
SCARB2-215ENST00000639145 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-215ENST00000639145 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 USP17L2Q6R6M4 530 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 PI4K2BQ8TCG2 481 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 RASGRP4Q8TDF6 673 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 DKC1O60832 514 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCARB2-215ENST00000639145 TECP42680 631 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 LUC7L2Q9Y383 392 aaKnown RBP15.26■□□□□ 0.03
SCARB2-215ENST00000639145 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 TTLL1O95922 423 aa15.26■□□□□ 0.03
SCARB2-215ENST00000639145 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-215ENST00000639145 SOS2Q07890 1332 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 EIF3JO75822 258 aaKnown RBP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 GNPTABQ3T906 1256 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 CNNM4Q6P4Q7 775 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 NOC4LQ9BVI4 516 aaKnown RBP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 CETN3O15182 167 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 BRD1O95696 1058 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 PCP11498 1178 aaKnown RBP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 HOOK3Q86VS8 718 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 FBXO18Q8NFZ0 1043 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 TRIM6Q9C030 488 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-215ENST00000639145 MTMR6Q9Y217 621 aa15.25■□□□□ 0.03
SCARB2-215ENST00000639145 A0A0G2JLW4 131 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 DDAH1O94760 285 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 CYP4A11Q02928 519 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 STRN3Q13033 797 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 MTX1Q13505 466 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 GPATCH4Q5T3I0 446 aaKnown RBP15.24■□□□□ 0.03
SCARB2-215ENST00000639145 MIER3Q7Z3K6 550 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 NEK8Q86SG6 692 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 DHX36Q9H2U1 1008 aaKnown RBP15.24■□□□□ 0.03
SCARB2-215ENST00000639145 SWAP70Q9UH65 585 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 CYP2D6P10635 497 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 ITPK1Q13572 414 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 RDH13Q8NBN7 331 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
SCARB2-215ENST00000639145 DNAI1Q9UI46 699 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 MROH2AA6NES4 1674 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 EPB41P11171 864 aaKnown RBP15.24■□□□□ 0.03
SCARB2-215ENST00000639145 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
SCARB2-215ENST00000639145 PODNQ7Z5L7 613 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 TSPYL1Q9H0U9 437 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 SERTAD1Q9UHV2 236 aa15.24■□□□□ 0.03
SCARB2-215ENST00000639145 GOLGA6L9A6NEM1 432 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 GCNT3O95395 438 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 TMCO3Q6UWJ1 677 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 SH3RF3Q8TEJ3 882 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-215ENST00000639145 DEFB132Q7Z7B7 95 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 TMEM110-MUSTN1A8MSY1 372 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 ECE2O60344 883 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 EEF2P13639 858 aaKnown RBP15.23■□□□□ 0.03
SCARB2-215ENST00000639145 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 METTL13Q8N6R0 699 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 MRPL44Q9H9J2 332 aaKnown RBP15.23■□□□□ 0.03
SCARB2-215ENST00000639145 RTEL1Q9NZ71 1219 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 EXOC3O60645 756 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 CRKP46108 304 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
SCARB2-215ENST00000639145 LINC00116Q8NCU8 138 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 PGBD1Q96JS3 809 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
SCARB2-215ENST00000639145 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 BMP3P12645 472 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 ACTN2P35609 894 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 CDK8P49336 464 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 KIF5AQ12840 1032 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 POSTNQ15063 836 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
SCARB2-215ENST00000639145 ZNF354CQ86Y25 554 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 COA7Q96BR5 231 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
SCARB2-215ENST00000639145 GH2P01242 217 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms